RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 KCNMB3Q9NPA1 279 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 CYP26B1Q9NR63 512 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 RNF19AQ9NV58 838 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 RGL1Q9NZL6 768 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 CLEC1BQ9P126 229 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 STK17AQ9UEE5 414 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 VAV3Q9UKW4 847 aa7.49□□□□□ -1.21
PSEN1-216ENST00000556066 PIN4Q9Y237 131 aaKnown RBP7.49□□□□□ -1.21
PSEN1-216ENST00000556066 MYO10Q9HD67 2058 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 EPG5Q9HCE0 2579 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 A0A0U1RQF3 1178 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 NT5C1B-RDH14C9J2C7 533 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 DKC1O60832 514 aaKnown RBP eCLIP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 MAFO75444 373 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 BAG4O95429 457 aaKnown RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 GLP2RO95838 553 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 EOMESO95936 686 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 P4HBP07237 508 aaKnown RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 SRGAP2CP0DJJ0 459 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 PPM1AP35813 382 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 KRT2P35908 639 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 ALDH7A1P49419 539 aaKnown RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 NEK4P51957 841 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 INSM1Q01101 510 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 CYP4A11Q02928 519 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 ME3Q16798 604 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 XKR9Q5GH70 373 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 EARS2Q5JPH6 523 aaKnown RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 PPP4R3AQ6IN85 833 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 PDE12Q6L8Q7 609 aaKnown RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 USP34Q70CQ2 3546 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 TMC7Q7Z402 723 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 ZNF410Q86VK4 478 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 TPH2Q8IWU9 490 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 SCUBE3Q8IX30 993 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 SMRP1Q8NCR6 262 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 MRPS27Q92552 414 aaKnown RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 HAS1Q92839 578 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 LPPQ93052 612 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 TMEM143Q96AN5 459 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 MSLNLQ96KJ4 702 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 CEP89Q96ST8 783 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 NAP1L4Q99733 375 aaKnown RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 JPH2Q9BR39 696 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 LXNQ9BS40 222 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 APOL5Q9BWW9 433 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 BACH2Q9BYV9 841 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 INO80BQ9C086 356 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 CHST12Q9NRB3 414 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 SPG21Q9NZD8 308 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 WRAP73Q9P2S5 460 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 MUTYHQ9UIF7 546 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 INPP5FQ9Y2H2 1132 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 USP15Q9Y4E8 981 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 COL4A3BPQ9Y5P4 624 aa7.48□□□□□ -1.21
PSEN1-216ENST00000556066 TDRD15B5MCY1 1934 aaKnown RBP7.48□□□□□ -1.21
PSEN1-216ENST00000556066 IGKV6-21A0A0C4DH24 114 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 HIDE1A8MVS5 230 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 FSCN2O14926 492 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 ZBTB39O15060 712 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 TBX3O15119 743 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 ZC3H11AO75152 810 aaKnown RBP eCLIP7.47□□□□□ -1.21
PSEN1-216ENST00000556066 NR1I2O75469 434 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 LARGE1O95461 756 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 EYA4O95677 639 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 SRGAP2BP0DMP2 458 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 SKIP12755 728 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 FDPSP14324 419 aaKnown RBP7.47□□□□□ -1.21
PSEN1-216ENST00000556066 ATF7P17544 494 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-216ENST00000556066 YWHABP31946 246 aaKnown RBP7.47□□□□□ -1.21
PSEN1-216ENST00000556066 TECP42680 631 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 PHKA2P46019 1235 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 BCAR1P56945 870 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 PLCB3Q01970 1234 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 RNASELQ05823 741 aaKnown RBP7.47□□□□□ -1.21
PSEN1-216ENST00000556066 LAMTOR4Q0VGL1 99 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 COASYQ13057 564 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 TRIM29Q14134 588 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 CTTNQ14247 550 aaKnown RBP7.47□□□□□ -1.21
PSEN1-216ENST00000556066 EPHA7Q15375 998 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 CALCRLQ16602 461 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 DUSP6Q16828 381 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 BRICD5Q6PL45 260 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 BLOC1S3Q6QNY0 202 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 GLB1LQ6UWU2 654 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 OTUD6AQ7L8S5 288 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 RNF135Q8IUD6 432 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 EXOC8Q8IYI6 725 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 SLFN12Q8IYM2 578 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 TMEM87AQ8NBN3 555 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 VN1R2Q8NFZ6 395 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 PRPF31Q8WWY3 499 aaKnown RBP7.47□□□□□ -1.21
PSEN1-216ENST00000556066 PSPC1Q8WXF1 523 aaKnown RBP7.47□□□□□ -1.21
PSEN1-216ENST00000556066 GTF3C6Q969F1 213 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 TMEM169Q96HH4 297 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 DYDC2Q96IM9 177 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 RPGRIP1Q96KN7 1286 aa7.47□□□□□ -1.21
PSEN1-216ENST00000556066 CDCA3Q99618 268 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-216ENST00000556066 MRPL9Q9BYD2 267 aaKnown RBP7.47□□□□□ -1.21
PSEN1-216ENST00000556066 GBP3Q9H0R5 595 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms