RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 GUF1Q8N442 669 aaKnown RBP8.37□□□□□ -1.07
TDP1-214ENST00000556063 SPATA20Q8TB22 786 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 ZNF507Q8TCN5 953 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 HERVK_113Q902F9 699 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 PGBD4Q96DM1 585 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 FIZ1Q96SL8 496 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 GDF15Q99988 308 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.37□□□□□ -1.07
TDP1-214ENST00000556063 TARS2Q9BW92 718 aaKnown RBP8.37□□□□□ -1.07
TDP1-214ENST00000556063 TRAIPQ9BWF2 469 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 GBP3Q9H0R5 595 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 TSPYL2Q9H2G4 693 aaPredicted RBP8.37□□□□□ -1.07
TDP1-214ENST00000556063 RGS18Q9NS28 235 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 CGNQ9P2M7 1197 aaKnown RBP8.37□□□□□ -1.07
TDP1-214ENST00000556063 LRFN2Q9ULH4 789 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 SLC4A7Q9Y6M7 1214 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 SIP14410 1827 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 MICAL3Q7RTP6 2002 aa8.37□□□□□ -1.07
TDP1-214ENST00000556063 A0A0U1RQF3 1178 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 ENPP3O14638 875 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 PSMA7O14818 248 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 KIAA0391O15091 583 aaKnown RBP8.36□□□□□ -1.07
TDP1-214ENST00000556063 CLDN3O15551 220 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 B4GALT5O43286 388 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 HOXA2O43364 376 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 ZNF623O75123 536 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 EOMESO95936 686 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 PIGRP01833 764 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 MYBP10242 640 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 MCF2P10911 925 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 HOXA11P31270 313 aaPredicted RBP8.36□□□□□ -1.07
TDP1-214ENST00000556063 STK4Q13043 487 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 DSC3Q14574 896 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 NFKBIBQ15653 356 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 AMHR2Q16671 573 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 KNOP1Q1ED39 458 aaKnown RBP8.36□□□□□ -1.07
TDP1-214ENST00000556063 BMT2Q1RMZ1 405 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 SASS6Q6UVJ0 657 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 MPZL3Q6UWV2 235 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 C16orf59Q7L2K0 433 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 EPM2AIP1Q7L775 607 aaPredicted RBP8.36□□□□□ -1.07
TDP1-214ENST00000556063 NPAS4Q8IUM7 802 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 PHOSPHO2Q8TCD6 241 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 RSPH1Q8WYR4 309 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 HPS3Q969F9 1004 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 CPB2Q96IY4 423 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 RNPC3Q96LT9 517 aaKnown RBP8.36□□□□□ -1.07
TDP1-214ENST00000556063 SLC9A7Q96T83 725 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 ACO2Q99798 780 aaKnown RBP8.36□□□□□ -1.07
TDP1-214ENST00000556063 CCDC94Q9BW85 323 aaPredicted RBP8.36□□□□□ -1.07
TDP1-214ENST00000556063 STRA6Q9BX79 667 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 OSBPL7Q9BZF2 842 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 TMX1Q9H3N1 280 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 ELAC1Q9H777 363 aaKnown RBP8.36□□□□□ -1.07
TDP1-214ENST00000556063 FAM105AQ9NUU6 356 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 ANKFY1Q9P2R3 1169 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 DACH1Q9UI36 760 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 MAN1B1Q9UKM7 699 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 PCDHB7Q9Y5E2 793 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 PCDHB2Q9Y5E7 798 aa8.36□□□□□ -1.07
TDP1-214ENST00000556063 C9IYK1 514 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 BIN1O00499 593 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 CALUO43852 315 aaPredicted RBP8.35□□□□□ -1.07
TDP1-214ENST00000556063 NPTXRO95502 500 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 LDHAP00338 332 aaKnown RBP8.35□□□□□ -1.07
TDP1-214ENST00000556063 ITGA4P13612 1032 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 GARTP22102 1010 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 CASP5P51878 434 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 YARSP54577 528 aaKnown RBP8.35□□□□□ -1.07
TDP1-214ENST00000556063 EPHB4P54760 987 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 WDR5P61964 334 aaKnown RBP8.35□□□□□ -1.07
TDP1-214ENST00000556063 FAM189BP81408 668 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 MORC3Q14149 939 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 NOLC1Q14978 699 aaKnown RBP eCLIP8.35□□□□□ -1.07
TDP1-214ENST00000556063 COBLL1Q53SF7 1204 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 CAVIN1Q6NZI2 390 aaKnown RBP8.35□□□□□ -1.07
TDP1-214ENST00000556063 ARMCX5Q6P1M9 558 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 TAS1R3Q7RTX0 852 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 ECHDC2Q86YB7 292 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 NELFCDQ8IXH7 590 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 ABI1Q8IZP0 508 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 MLKLQ8NB16 471 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 KIAA0895Q8NCT3 520 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 SCFD1Q8WVM8 642 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 POMGNT1Q8WZA1 660 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 ERCC4Q92889 916 aaPredicted RBP8.35□□□□□ -1.07
TDP1-214ENST00000556063 DHTKD1Q96HY7 919 aaPredicted RBP8.35□□□□□ -1.07
TDP1-214ENST00000556063 TSG101Q99816 390 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 ZBED2Q9BTP6 218 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 PDZD7Q9H5P4 517 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 UBN1Q9NPG3 1134 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 TYW1Q9NV66 732 aaKnown RBP8.35□□□□□ -1.07
TDP1-214ENST00000556063 TMEM161AQ9NX61 479 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 GDAQ9Y2T3 454 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 MYO9BQ13459 2157 aa8.35□□□□□ -1.07
TDP1-214ENST00000556063 TRIOBPQ9H2D6 2365 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 A0A1W2PPC1 479 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 BICDL2A1A5D9 508 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 PDXKO00764 312 aa8.34□□□□□ -1.07
TDP1-214ENST00000556063 OGTO15294 1046 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms