RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 STK25O00506 426 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 PAPLNO95428 1278 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 P4HBP07237 508 aaKnown RBP12.09□□□□□ -0.47
TDP1-212ENST00000555565 CNPP09543 421 aaKnown RBP12.09□□□□□ -0.47
TDP1-212ENST00000555565 CA8P35219 290 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 SPIRE1Q08AE8 756 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 BMS1Q14692 1282 aaKnown RBP12.09□□□□□ -0.47
TDP1-212ENST00000555565 ZNF410Q86VK4 478 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 PPFIBP1Q86W92 1011 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 POTEDQ86YR6 584 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 RHPN2Q8IUC4 686 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 KSR1Q8IVT5 923 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 CMASQ8NFW8 434 aaPredicted RBP12.09□□□□□ -0.47
TDP1-212ENST00000555565 WASF1Q92558 559 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 GTF3C6Q969F1 213 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 MYADMQ96S97 322 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 NAP1L4Q99733 375 aaKnown RBP12.09□□□□□ -0.47
TDP1-212ENST00000555565 TRAIPQ9BWF2 469 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 MRPL9Q9BYD2 267 aaKnown RBP12.09□□□□□ -0.47
TDP1-212ENST00000555565 CHST12Q9NRB3 414 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 DNAJB4Q9UDY4 337 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 SIT1Q9Y3P8 196 aa12.09□□□□□ -0.47
TDP1-212ENST00000555565 ZC3H11AO75152 810 aaKnown RBP eCLIP12.08□□□□□ -0.48
TDP1-212ENST00000555565 SEC24BO95487 1268 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 SRFP11831 508 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 TGM1P22735 817 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 SFPQP23246 707 aaKnown RBP eCLIP12.08□□□□□ -0.48
TDP1-212ENST00000555565 KRT2P35908 639 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 NEK4P51957 841 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 EPHA7Q15375 998 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 SPECC1Q5M775 1068 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 ZC3H14Q6PJT7 736 aaKnown RBP12.08□□□□□ -0.48
TDP1-212ENST00000555565 NSUN7Q8NE18 718 aaKnown RBP12.08□□□□□ -0.48
TDP1-212ENST00000555565 GPR152Q8TDT2 470 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 NLRP4Q96MN2 994 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 JPH2Q9BR39 696 aaPredicted RBP12.08□□□□□ -0.48
TDP1-212ENST00000555565 LXNQ9BS40 222 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 RHOBTB2Q9BYZ6 727 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 DHX33Q9H6R0 707 aaKnown RBP12.08□□□□□ -0.48
TDP1-212ENST00000555565 IFT122Q9HBG6 1241 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 WDR6Q9NNW5 1121 aaKnown RBP12.08□□□□□ -0.48
TDP1-212ENST00000555565 TBC1D13Q9NVG8 400 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 DACT1Q9NYF0 836 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 RGL1Q9NZL6 768 aa12.08□□□□□ -0.48
TDP1-212ENST00000555565 CHD6Q8TD26 2715 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 ZBTB39O15060 712 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 MARCH6O60337 910 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 JAK2O60674 1132 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 DKC1O60832 514 aaKnown RBP eCLIP12.07□□□□□ -0.48
TDP1-212ENST00000555565 LRRN2O75325 713 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 OFD1O75665 1012 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 EFEMP2O95967 443 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 PHKA2P46019 1235 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 SLC11A1P49279 550 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 ST3GAL1Q11201 340 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 NCAPH2Q6IBW4 605 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 ZNF280BQ86YH2 543 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 C4orf19Q8IY42 314 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 SLFN12Q8IYM2 578 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 TMEM87AQ8NBN3 555 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 PRPF31Q8WWY3 499 aaKnown RBP12.07□□□□□ -0.48
TDP1-212ENST00000555565 SLC7A3Q8WY07 619 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 LPPQ93052 612 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 DYDC2Q96IM9 177 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 CEP170P1Q96L14 293 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 HINFPQ9BQA5 517 aa12.07□□□□□ -0.48
TDP1-212ENST00000555565 INO80BQ9C086 356 aaPredicted RBP12.07□□□□□ -0.48
TDP1-212ENST00000555565 PIN4Q9Y237 131 aaKnown RBP12.07□□□□□ -0.48
TDP1-212ENST00000555565 MAP1BP46821 2468 aaKnown RBP12.06□□□□□ -0.48
TDP1-212ENST00000555565 CCDC195A0A1B0GUA6 201 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 BTBD18B2RXH4 712 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 ANHXE9PGG2 379 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 WNT7AO00755 349 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 KLRC2P26717 231 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 YWHABP31946 246 aaKnown RBP12.06□□□□□ -0.48
TDP1-212ENST00000555565 RFC5P40937 340 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 STARD6P59095 220 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 CYP4A11Q02928 519 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 CTTNQ14247 550 aaKnown RBP12.06□□□□□ -0.48
TDP1-212ENST00000555565 LONRF3Q496Y0 759 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 VARS2Q5ST30 1063 aaKnown RBP12.06□□□□□ -0.48
TDP1-212ENST00000555565 TWF2Q6IBS0 349 aaKnown RBP12.06□□□□□ -0.48
TDP1-212ENST00000555565 CATSPER4Q7RTX7 472 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 NXPE3Q969Y0 559 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 TMEM143Q96AN5 459 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 ZNF707Q96C28 371 aaPredicted RBP12.06□□□□□ -0.48
TDP1-212ENST00000555565 FOXQ1Q9C009 403 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 ZSWIM4Q9H7M6 989 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 BRMS1Q9HCU9 246 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 ARHGEF3Q9NR81 526 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 SLC2A4RGQ9NR83 387 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 BMP2KQ9NSY1 1161 aaPredicted RBP12.06□□□□□ -0.48
TDP1-212ENST00000555565 PPME1Q9Y570 386 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 COL4A3BPQ9Y5P4 624 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 ARID2Q68CP9 1835 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 CACNA1GO43497 2377 aa12.06□□□□□ -0.48
TDP1-212ENST00000555565 USP24Q9UPU5 2620 aa12.05□□□□□ -0.48
TDP1-212ENST00000555565 ZNF623O75123 536 aa12.05□□□□□ -0.48
TDP1-212ENST00000555565 RFPL2O75678 378 aa12.05□□□□□ -0.48
TDP1-212ENST00000555565 DDHD2O94830 711 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms