RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 TOM1L1O75674 476 aa15.66■□□□□ 0.1
CHD8-208ENST00000555301 EDN1P05305 212 aa15.66■□□□□ 0.1
CHD8-208ENST00000555301 KCNJ6P48051 423 aa15.66■□□□□ 0.1
CHD8-208ENST00000555301 RAB27AP51159 221 aa15.66■□□□□ 0.1
CHD8-208ENST00000555301 SYCP3Q8IZU3 236 aa15.66■□□□□ 0.1
CHD8-208ENST00000555301 GLIS3Q8NEA6 775 aa15.66■□□□□ 0.1
CHD8-208ENST00000555301 TRIM6Q9C030 488 aaPredicted RBP15.66■□□□□ 0.1
CHD8-208ENST00000555301 PDZD7Q9H5P4 517 aa15.66■□□□□ 0.1
CHD8-208ENST00000555301 A0A0U1RQF3 1178 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 TTLL13PA6NNM8 815 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 AMHP03971 560 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 PPP1R2P41236 205 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 WDR5P61964 334 aaKnown RBP15.65■□□□□ 0.1
CHD8-208ENST00000555301 SNRPFP62306 86 aaKnown RBP15.65■□□□□ 0.1
CHD8-208ENST00000555301 KCNA1Q09470 495 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 MORC3Q14149 939 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 DCAF4L1Q3SXM0 396 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 COBLL1Q53SF7 1204 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 SLFN12LQ6IEE8 588 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 CAVIN1Q6NZI2 390 aaKnown RBP15.65■□□□□ 0.1
CHD8-208ENST00000555301 MPZL3Q6UWV2 235 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 RTN4RL1Q86UN2 441 aaPredicted RBP15.65■□□□□ 0.1
CHD8-208ENST00000555301 GUF1Q8N442 669 aaKnown RBP15.65■□□□□ 0.1
CHD8-208ENST00000555301 LINC01599Q8WXQ3 324 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 TCHPQ9BT92 498 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 PTPRHQ9HD43 1115 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 FAM105AQ9NUU6 356 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 USP20Q9Y2K6 914 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 GDAQ9Y2T3 454 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 LTBP2Q14767 1821 aa15.65■□□□□ 0.1
CHD8-208ENST00000555301 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.64■□□□□ 0.09
CHD8-208ENST00000555301 C9IYK1 514 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 BIN1O00499 593 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 CLDN3O15551 220 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 ZNF623O75123 536 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 PROZP22891 400 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 FAM189BP81408 668 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 STIM1Q13586 685 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 KNOP1Q1ED39 458 aaKnown RBP15.64■□□□□ 0.09
CHD8-208ENST00000555301 ZNF568Q3ZCX4 644 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 UBXN11Q5T124 520 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 RBM43Q6ZSC3 357 aaKnown RBP15.64■□□□□ 0.09
CHD8-208ENST00000555301 HS2ST1Q7LGA3 356 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 CDR2LQ86X02 465 aaPredicted RBP15.64■□□□□ 0.09
CHD8-208ENST00000555301 NELFCDQ8IXH7 590 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 HACE1Q8IYU2 909 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 GBP3Q9H0R5 595 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 ELAC1Q9H777 363 aaKnown RBP15.64■□□□□ 0.09
CHD8-208ENST00000555301 TMEM63CQ9P1W3 806 aa15.64■□□□□ 0.09
CHD8-208ENST00000555301 CGNQ9P2M7 1197 aaKnown RBP15.64■□□□□ 0.09
CHD8-208ENST00000555301 NPTXRO95502 500 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 EOMESO95936 686 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 STAG3L1P0CL83 205 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 MCF2P10911 925 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 HOXD13P35453 343 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 MATR3P43243 847 aaKnown RBP eCLIP15.63■□□□□ 0.09
CHD8-208ENST00000555301 MCL1Q07820 350 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 NOLC1Q14978 699 aaKnown RBP eCLIP15.63■□□□□ 0.09
CHD8-208ENST00000555301 SHHQ15465 462 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 C9orf50Q5SZB4 431 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 RASIP1Q5U651 963 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 EEF1DP3Q658K8 133 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 ISM2Q6H9L7 571 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.63■□□□□ 0.09
CHD8-208ENST00000555301 ECHDC2Q86YB7 292 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 GOLGA5Q8TBA6 731 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 PHOSPHO2Q8TCD6 241 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 PGBD4Q96DM1 585 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 RNPC3Q96LT9 517 aaKnown RBP15.63■□□□□ 0.09
CHD8-208ENST00000555301 SLC9A7Q96T83 725 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 EIF2AQ9BY44 585 aaKnown RBP15.63■□□□□ 0.09
CHD8-208ENST00000555301 CDT1Q9H211 546 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 TMEM161AQ9NX61 479 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 ANKFY1Q9P2R3 1169 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 LRFN2Q9ULH4 789 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 PCDHB2Q9Y5E7 798 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 STYXL1Q9Y6J8 313 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 SLC4A7Q9Y6M7 1214 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 SIP14410 1827 aa15.63■□□□□ 0.09
CHD8-208ENST00000555301 ANKRD63C9JTQ0 380 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 RBAK-RBAKDNI3L0D1 243 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 ABLIM1O14639 778 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 LETM1O95202 739 aaPredicted RBP15.62■□□□□ 0.09
CHD8-208ENST00000555301 GARTP22102 1010 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 PRCPP42785 496 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 KYAT1Q16773 422 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 SLC39A4Q6P5W5 647 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 CHRDL2Q6WN34 429 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 NPAS4Q8IUM7 802 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 SMYD4Q8IYR2 804 aaPredicted RBP15.62■□□□□ 0.09
CHD8-208ENST00000555301 ADSSL1Q8N142 457 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 POMGNT1Q8WZA1 660 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 TOP1MTQ969P6 601 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 ZBTB45Q96K62 511 aaPredicted RBP15.62■□□□□ 0.09
CHD8-208ENST00000555301 UBN1Q9NPG3 1134 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 TYW1Q9NV66 732 aaKnown RBP15.62■□□□□ 0.09
CHD8-208ENST00000555301 CXXC1Q9P0U4 656 aaPredicted RBP15.62■□□□□ 0.09
CHD8-208ENST00000555301 MAPK8IP1Q9UQF2 711 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 IPPQ9Y573 584 aa15.62■□□□□ 0.09
CHD8-208ENST00000555301 PCDHB7Q9Y5E2 793 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms