RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 CCDC33Q8N5R6 958 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 FAM76AQ8TAV0 307 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 PRPF31Q8WWY3 499 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 HEXIM2Q96MH2 286 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 SLC38A10Q9HBR0 1119 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 RBM12Q9NTZ6 932 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 SUCLA2Q9P2R7 463 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 ADCY8P40145 1251 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 IFNAR2P48551 515 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 ZNF157P51786 506 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 TMEM119Q4V9L6 283 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 KRT39Q6A163 491 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 ANKRD42Q8N9B4 389 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 SPATA4Q8NEY3 305 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 HDAC7Q8WUI4 952 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 C1orf54Q8WWF1 131 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 TATDN2Q93075 761 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 KLK14Q9P0G3 267 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 RPS12P25398 132 aaKnown RBP13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 CIITAP33076 1130 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 MIIPQ5JXC2 388 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 FBXL13Q8NEE6 735 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 RNF34Q969K3 372 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 SPATC1LQ9H0A9 340 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 THAP2Q9H0W7 228 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 FAM204AQ9H8W3 233 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 LRRD1A4D1F6 860 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 C19orf81C9J6K1 198 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 SGPL1O95470 568 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 SFNP31947 248 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 SOX5P35711 763 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 PPP2R5AQ15172 486 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 SLC18A3Q16572 532 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 KIZQ2M2Z5 673 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 SEPT1Q8WYJ6 367 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 ERGIC2Q96RQ1 377 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 MAK16Q9BXY0 300 aaKnown RBP13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 MLXIPLQ9NP71 852 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 ADAM22Q9P0K1 906 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 RASAL2Q9UJF2 1139 aa13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
ARHGEF40-206ENST00000555232 GOLGA8MH3BSY2 632 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 TBX2Q13207 712 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 XKR3Q5GH77 459 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 FRMD5Q7Z6J6 570 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 SPATA20Q8TB22 786 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 SLC35G2Q8TBE7 412 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 POLR3CQ9BUI4 534 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 CYP26B1Q9NR63 512 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 APEX2Q9UBZ4 518 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 RGS17Q9UGC6 210 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 DMGDHQ9UI17 866 aaKnown RBP13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 IGKV6D-41A0A0C4DH26 115 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 PSMD10O75832 226 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 DESP17661 470 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 FSTL1Q12841 308 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 NEDD9Q14511 834 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 TAF1CQ15572 869 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 EFCAB12Q6NXP0 572 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 B4GALNT4Q76KP1 1039 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 TRIM59Q8IWR1 403 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 NUP85Q9BW27 656 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 MIS12Q9H081 205 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 RRAGCQ9HB90 399 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 NGRNQ9NPE2 291 aaKnown RBP13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 PDGFCQ9NRA1 345 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 SUFUQ9UMX1 484 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 ITGB4P16144 1822 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 DGAT1O75907 488 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 C6orf222P0C671 652 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 DSG3P32926 999 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 RGS7P49802 495 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 KCNMA1Q12791 1236 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 ORC2Q13416 577 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 TTLL4Q14679 1199 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 LLGL2Q6P1M3 1020 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 LRRC55Q6ZSA7 311 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 SYCE1Q8N0S2 351 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 OR2W6PQ8NHA6 318 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 RPF1Q9H9Y2 349 aaKnown RBP13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 TBX20Q9UMR3 447 aa13.12□□□□□ -0.31
ARHGEF40-206ENST00000555232 KLRG2A4D1S0 409 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 PGRMC1O00264 195 aaKnown RBP13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 ARPP19P56211 112 aa13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 PAK2Q13177 524 aa13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 Q4G0T1 1027 aa13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 SLC47A2Q86VL8 602 aa13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 OR6B3Q8NGW1 331 aa13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 AFAP1L1Q8TED9 768 aa13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 SLC35C1Q96A29 364 aa13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 TRIM51Q9BSJ1 452 aa13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 RANBP17Q9H2T7 1088 aaKnown RBP13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 ADARB2Q9NS39 739 aaKnown RBP13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 CCNE2O96020 404 aa13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 PAN2Q504Q3 1202 aaKnown RBP13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 SH2D3CQ8N5H7 860 aa13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 CPB2Q96IY4 423 aa13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 SYT17Q9BSW7 474 aa13.11□□□□□ -0.31
ARHGEF40-206ENST00000555232 NUB1Q9Y5A7 615 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms