RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 POMCP01189 267 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 SSBP05455 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
SHMT2-215ENST00000554656 ASGR2P07307 311 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 CNPP09543 421 aaKnown RBP11.77□□□□□ -0.53
SHMT2-215ENST00000554656 NCLP19338 710 aaKnown RBP11.77□□□□□ -0.53
SHMT2-215ENST00000554656 PTMSP20962 102 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 KRT2P35908 639 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 MTHFRP42898 656 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 FOSBP53539 338 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 PTENP60484 403 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 CAPSQ13938 189 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 AMHR2Q16671 573 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 CES5AQ6NT32 575 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 SUGP1Q8IWZ8 645 aaKnown RBP11.77□□□□□ -0.53
SHMT2-215ENST00000554656 NSUN7Q8NE18 718 aaKnown RBP11.77□□□□□ -0.53
SHMT2-215ENST00000554656 URGCPQ8TCY9 931 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 PGBD4Q96DM1 585 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 CPB2Q96IY4 423 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 NECTIN4Q96NY8 510 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 GBP4Q96PP9 640 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 MTRQ99707 1265 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 EIF2AK1Q9BQI3 630 aaKnown RBP11.77□□□□□ -0.53
SHMT2-215ENST00000554656 ZSWIM4Q9H7M6 989 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 MIOSQ9NXC5 875 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 NR2E1Q9Y466 385 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 HES2Q9Y543 173 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 IPPQ9Y573 584 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 CNTNAP2Q9UHC6 1331 aa11.77□□□□□ -0.53
SHMT2-215ENST00000554656 MYH15Q9Y2K3 1946 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 A0A087WWV3 80 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 NRP1O14786 923 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 JAK2O60674 1132 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 LYPLA2O95372 231 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 XBP1P17861 261 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 GJB2P29033 226 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 AVPR2P30518 371 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 CLCN4P51793 760 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 MBTD1Q05BQ5 628 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 DSC1Q08554 894 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 TMC5Q6UXY8 1006 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 TAS1R1Q7RTX1 841 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 IFNLR1Q8IU57 520 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-215ENST00000554656 TPH2Q8IWU9 490 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 COLGALT2Q8IYK4 626 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 SLFN12Q8IYM2 578 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 RNF168Q8IYW5 571 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-215ENST00000554656 TCP11Q8WWU5 503 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 RIPOR3Q96MK2 946 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 ZFP42Q96MM3 310 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 KLHL5Q96PQ7 755 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 NAP1L4Q99733 375 aaKnown RBP11.76□□□□□ -0.53
SHMT2-215ENST00000554656 HSD17B14Q9BPX1 270 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 TMEM175Q9BSA9 504 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 SORCS3Q9UPU3 1222 aa11.76□□□□□ -0.53
SHMT2-215ENST00000554656 PRG3Q9Y2Y8 225 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-215ENST00000554656 CARNS1A5YM72 827 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 ARL5CA6NH57 179 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 BTBD18B2RXH4 712 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 ASAP2O43150 1006 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 B4GALT5O43286 388 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 MARCH6O60337 910 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 GLRA2P23416 452 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 ARL2P36404 184 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 MLH1P40692 756 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 RARRES1P49788 294 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 SCNN1GP51170 649 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 PTPN5P54829 565 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 GIT2Q14161 759 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 BMS1Q14692 1282 aaKnown RBP11.75□□□□□ -0.53
SHMT2-215ENST00000554656 NFKBIBQ15653 356 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 OTUD6AQ7L8S5 288 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 ZBTB33Q86T24 672 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 EXOC8Q8IYI6 725 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 ZDHHC14Q8IZN3 488 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 TDRD5Q8NAT2 981 aaKnown RBP11.75□□□□□ -0.53
SHMT2-215ENST00000554656 MTMR9Q96QG7 549 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 GAD1Q99259 594 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 HERC2P3Q9BVR0 1158 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 TMEM60Q9H2L4 133 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 NXF3Q9H4D5 531 aaKnown RBP11.75□□□□□ -0.53
SHMT2-215ENST00000554656 SFXN1Q9H9B4 322 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 FAM86C1Q9NVL1 165 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 LIMD1Q9UGP4 676 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 FAN1Q9Y2M0 1017 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 VWA8A3KMH1 1905 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 TRIP11Q15643 1979 aa11.75□□□□□ -0.53
SHMT2-215ENST00000554656 POTEMA6NI47 508 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 STX6O43752 255 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 NEMFO60524 1076 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 ERLIN2O94905 339 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 BAG4O95429 457 aaKnown RBP11.74□□□□□ -0.53
SHMT2-215ENST00000554656 SOD2P04179 222 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 ITGA4P13612 1032 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 ARF4P18085 180 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-215ENST00000554656 SYT1P21579 422 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 MTMR3Q13615 1198 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 MXD4Q14582 209 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-215ENST00000554656 CALCRLQ16602 461 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 GPR149Q86SP6 731 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 CABP7Q86V35 215 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms