RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 A0A1W2PQ27 194 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 A0A1W2PQ64 194 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 A0A1W2PQD8 194 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 K7ENM7 598 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 RFXAPO00287 272 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 HOXA2O43364 376 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 MAPTP10636 758 aaKnown RBP15.53■□□□□ 0.08
PTCH1-226ENST00000553011 IDEP14735 1019 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 NCKAP1LP55160 1127 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 ERVK-21P61565 698 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 ATF7IP2Q5U623 682 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 SLC27A1Q6PCB7 646 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 AGMOQ6ZNB7 445 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 HAUS6Q7Z4H7 955 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 MRPL10Q7Z7H8 261 aaKnown RBP15.53■□□□□ 0.08
PTCH1-226ENST00000553011 SFR1Q86XK3 245 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 FSIP1Q8NA03 581 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 MYLIPQ8WY64 445 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 CASD1Q96PB1 797 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 FIZ1Q96SL8 496 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 CDX2Q99626 313 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-226ENST00000553011 TARS2Q9BW92 718 aaKnown RBP15.53■□□□□ 0.08
PTCH1-226ENST00000553011 TMEM117Q9H0C3 514 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 RNF39Q9H2S5 420 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 GOLPH3LQ9H4A5 285 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 NXF3Q9H4D5 531 aaKnown RBP15.53■□□□□ 0.08
PTCH1-226ENST00000553011 SERTAD1Q9UHV2 236 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 IPPQ9Y573 584 aa15.53■□□□□ 0.08
PTCH1-226ENST00000553011 PLXNA4Q9HCM2 1894 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-226ENST00000553011 FAM237AA0A1B0GTK4 181 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 N4BP3O15049 544 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 ACTN4O43707 911 aaKnown RBP15.52■□□□□ 0.08
PTCH1-226ENST00000553011 TRAK2O60296 914 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 CASP1P29466 404 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 NMT1P30419 496 aaKnown RBP15.52■□□□□ 0.08
PTCH1-226ENST00000553011 NDUFA8P51970 172 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 FAM178BQ8IXR5 827 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 GRAMD1CQ8IYS0 662 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 ABI1Q8IZP0 508 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 MRPS27Q92552 414 aaKnown RBP15.52■□□□□ 0.08
PTCH1-226ENST00000553011 PGBD4Q96DM1 585 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 ACO2Q99798 780 aaKnown RBP15.52■□□□□ 0.08
PTCH1-226ENST00000553011 APOL6Q9BWW8 343 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 MRPL4Q9BYD3 311 aaKnown RBP15.52■□□□□ 0.08
PTCH1-226ENST00000553011 TRIM9Q9C026 710 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 TRIM6Q9C030 488 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-226ENST00000553011 KCNG1Q9UIX4 513 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 INPP5FQ9Y2H2 1132 aa15.52■□□□□ 0.08
PTCH1-226ENST00000553011 BRWD1Q9NSI6 2320 aa15.52■□□□□ 0.07
PTCH1-226ENST00000553011 FRMD3A2A2Y4 597 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 H0YCG3 227 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 ITGA4P13612 1032 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 CTNNB1P35222 781 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 AFMP43652 599 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 STRN3Q13033 797 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 EPC2Q52LR7 807 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 LRRC55Q6ZSA7 311 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 TMEM192Q8IY95 271 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 CNNM3Q8NE01 707 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 FBXO22Q8NEZ5 403 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 GDPD5Q8WTR4 605 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 CLP1Q92989 425 aaKnown RBP15.51■□□□□ 0.07
PTCH1-226ENST00000553011 PYM1Q9BRP8 204 aaKnown RBP15.51■□□□□ 0.07
PTCH1-226ENST00000553011 RSAD1Q9HA92 442 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 MAGEF1Q9HAY2 307 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 TYW1Q9NV66 732 aaKnown RBP15.51■□□□□ 0.07
PTCH1-226ENST00000553011 TBC1D7Q9P0N9 293 aa15.51■□□□□ 0.07
PTCH1-226ENST00000553011 OFD1O75665 1012 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 SLFN14P0C7P3 912 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 GAP43P17677 238 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 BMPR1AP36894 532 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 SYKP43405 635 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 AFF1P51825 1210 aaKnown RBP15.5■□□□□ 0.07
PTCH1-226ENST00000553011 ASIC1P78348 528 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 AMPD3Q01432 767 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 ADGRE1Q14246 886 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 ZC2HC1CQ53FD0 456 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-226ENST00000553011 HERC4Q5GLZ8 1057 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-226ENST00000553011 GLB1LQ6UWU2 654 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 CEP57L1Q8IYX8 460 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 KCNN1Q92952 543 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 ZBTB45Q96K62 511 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-226ENST00000553011 SAMD11Q96NU1 681 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 IPO9Q96P70 1041 aaKnown RBP15.5■□□□□ 0.07
PTCH1-226ENST00000553011 C7orf25Q9BPX7 421 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 ADPGKQ9BRR6 497 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 LRRC27Q9C0I9 530 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 BLZF1Q9H2G9 400 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 CWH43Q9H720 699 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 PTPRHQ9HD43 1115 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 PANK4Q9NVE7 773 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 TBX20Q9UMR3 447 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 TNFSF13BQ9Y275 285 aa15.5■□□□□ 0.07
PTCH1-226ENST00000553011 PDCD11Q14690 1871 aaKnown RBP15.49■□□□□ 0.07
PTCH1-226ENST00000553011 ABLIM1O14639 778 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 LPXNO60711 386 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 AKAP5P24588 427 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 COASYQ13057 564 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 CUL4BQ13620 913 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms