RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 TNMDQ9H2S6 317 aa10.93□□□□□ -0.66
LETMD1-234ENST00000552645 C17orf75Q9HAS0 396 aa10.93□□□□□ -0.66
LETMD1-234ENST00000552645 RGS18Q9NS28 235 aa10.93□□□□□ -0.66
LETMD1-234ENST00000552645 AGPAT5Q9NUQ2 364 aa10.93□□□□□ -0.66
LETMD1-234ENST00000552645 DACT1Q9NYF0 836 aa10.93□□□□□ -0.66
LETMD1-234ENST00000552645 TBC1D7Q9P0N9 293 aa10.93□□□□□ -0.66
LETMD1-234ENST00000552645 K7ENM7 598 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 CASP1P29466 404 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 EFNA5P52803 228 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 ASIC1P78348 528 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 PRPF4BQ13523 1007 aaKnown RBP10.92□□□□□ -0.66
LETMD1-234ENST00000552645 DSC3Q14574 896 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 SLC24A5Q71RS6 500 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 SFR1Q86XK3 245 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 FAM178BQ8IXR5 827 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 PHOSPHO2Q8TCD6 241 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 NFKBIZQ9BYH8 718 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 TRIM6Q9C030 488 aaPredicted RBP10.92□□□□□ -0.66
LETMD1-234ENST00000552645 LRRC27Q9C0I9 530 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 C1orf112Q9NSG2 853 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 PANK4Q9NVE7 773 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 PRMT7Q9NVM4 692 aaPredicted RBP10.92□□□□□ -0.66
LETMD1-234ENST00000552645 KBTBD4Q9NVX7 518 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 MSRAQ9UJ68 235 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 PCDHB7Q9Y5E2 793 aa10.92□□□□□ -0.66
LETMD1-234ENST00000552645 TTLL13PA6NNM8 815 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 C9IYK1 514 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 ACTN4O43707 911 aaKnown RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 GADD45BO75293 160 aaPredicted RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 GJB5O95377 273 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 STAG3L1P0CL83 205 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 ARF4P18085 180 aaPredicted RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 DNAJB2P25686 324 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 NMT1P30419 496 aaKnown RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 SARSP49591 514 aaKnown RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 STRN3Q13033 797 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 PAN2Q504Q3 1202 aaKnown RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 HERC4Q5GLZ8 1057 aaPredicted RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 NOTUMQ6P988 496 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 IFNLR1Q8IU57 520 aaPredicted RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 CNNM3Q8NE01 707 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 TOP1MTQ969P6 601 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 DNAJC19Q96DA6 116 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 BICD1Q96G01 975 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 APOL6Q9BWW8 343 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 PBX4Q9BYU1 374 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 NKX2-4Q9H2Z4 354 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 MRPL44Q9H9J2 332 aaKnown RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 MAGEF1Q9HAY2 307 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 CHST12Q9NRB3 414 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 KCNG1Q9UIX4 513 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 HPSEQ9Y251 543 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 PHLPP2Q6ZVD8 1323 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 ZNF202O95125 648 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 CA3P07451 260 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 FGFR1P11362 822 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 HOXA11P31270 313 aaPredicted RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 UBE2HP62256 183 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 SMAD3P84022 425 aaKnown RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 CUL4BQ13620 913 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 PCBP1Q15365 356 aaKnown RBP eCLIP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 RAB30Q15771 203 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 AMHR2Q16671 573 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 HAUS6Q7Z4H7 955 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 ECHDC2Q86YB7 292 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 NPAS4Q8IUM7 802 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 CCDC65Q8IXS2 484 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 TMEM161BQ8NDZ6 487 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 SPIRE2Q8WWL2 714 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 LPPQ93052 612 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 HPS3Q969F9 1004 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 TIFAQ96CG3 184 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 PAGE5Q96GU1 130 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 EIF2AQ9BY44 585 aaKnown RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 TRIM9Q9C026 710 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 CCDC113Q9H0I3 377 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 FZD8Q9H461 694 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 FAM105AQ9NUU6 356 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 ARHGAP28Q9P2N2 729 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 YBX2Q9Y2T7 364 aaKnown RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 INSL6Q9Y581 213 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 PCDHB2Q9Y5E7 798 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 PCDHA11Q9Y5I1 949 aa10.91□□□□□ -0.66
LETMD1-234ENST00000552645 FNDC1Q4ZHG4 1894 aaPredicted RBP10.91□□□□□ -0.66
LETMD1-234ENST00000552645 CNTNAP2Q9UHC6 1331 aa10.9□□□□□ -0.66
LETMD1-234ENST00000552645 A0A0U1RQF3 1178 aa10.9□□□□□ -0.66
LETMD1-234ENST00000552645 LCHNA4D1U4 455 aa10.9□□□□□ -0.66
LETMD1-234ENST00000552645 H0YCG3 227 aa10.9□□□□□ -0.66
LETMD1-234ENST00000552645 ACKR2O00590 384 aa10.9□□□□□ -0.66
LETMD1-234ENST00000552645 NPTXRO95502 500 aa10.9□□□□□ -0.66
LETMD1-234ENST00000552645 EDN1P05305 212 aa10.9□□□□□ -0.66
LETMD1-234ENST00000552645 MAPTP10636 758 aaKnown RBP10.9□□□□□ -0.66
LETMD1-234ENST00000552645 HARSP12081 509 aaKnown RBP10.9□□□□□ -0.66
LETMD1-234ENST00000552645 GAP43P17677 238 aa10.9□□□□□ -0.66
LETMD1-234ENST00000552645 AXLP30530 894 aa10.9□□□□□ -0.66
LETMD1-234ENST00000552645 MATR3P43243 847 aaKnown RBP eCLIP10.9□□□□□ -0.66
LETMD1-234ENST00000552645 GATMP50440 423 aa10.9□□□□□ -0.66
LETMD1-234ENST00000552645 ZNF131P52739 623 aa10.9□□□□□ -0.66
LETMD1-234ENST00000552645 COASYQ13057 564 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms