RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 TEX2Q8IWB9 1127 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 SUCLA2Q9P2R7 463 aaPredicted RBP11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 SNX12Q9UMY4 172 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 SLIT3O75094 1523 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 PSMA2P25787 234 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 EMC2Q15006 297 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 KCTD6Q8NC69 237 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 CEP63Q96MT8 703 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 FHDC1Q9C0D6 1143 aaPredicted RBP11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 KLRC4O43908 158 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 ITGA4P13612 1032 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 BRD2P25440 801 aaKnown RBP11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 SLC18A3Q16572 532 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 KLHDC7AQ5VTJ3 777 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 IL31Q6EBC2 164 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 FBXL13Q8NEE6 735 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 ATXN7L3BQ96GX2 97 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 P2RX7Q99572 595 aaKnown RBP11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 CPA4Q9UI42 421 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 TLR3O15455 904 aaKnown RBP11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 CCDC6Q16204 474 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 FMNL3Q8IVF7 1028 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 NETO2Q8NC67 525 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 HASPINQ8TF76 798 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 SAMD15Q9P1V8 674 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 PDXKO00764 312 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 C6orf222P0C671 652 aaPredicted RBP11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 SREBF1P36956 1147 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 NPTX2P47972 431 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 PPFIA1Q13136 1202 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 C1orf228Q6PIY5 440 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 FBF1Q8TES7 1133 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 RNPC3Q96LT9 517 aaKnown RBP11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 RAB17Q9H0T7 212 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 TAS2R14Q9NYV8 317 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 APEX2Q9UBZ4 518 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 M0QYV0 167 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 SART1O43290 800 aaKnown RBP11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 ICAM1P05362 532 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 ITGB5P18084 799 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 SCP2P22307 547 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 JAK3P52333 1124 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 ZNF131P52739 623 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 SLC8A3P57103 927 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 UGCGQ16739 394 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 CRY2Q49AN0 593 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 ANKMY2Q8IV38 441 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 FMO2Q99518 471 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 PDCD2LQ9BRP1 358 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 TSR3Q9UJK0 312 aaKnown RBP11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 SNX9Q9Y5X1 595 aa11.55□□□□□ -0.56
TGFBR1-209ENST00000552516 RAD51CO43502 376 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 STX2P32856 288 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 OTOP1Q7RTM1 612 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 C9orf72Q96LT7 481 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 MTMR12Q9C0I1 747 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 A0A1W2PQC6 194 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 IRF6O14896 467 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 TERF2Q15554 542 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 FAM133BQ5BKY9 247 aaKnown RBP11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 ZNF667Q5HYK9 610 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 PRUNE1Q86TP1 453 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 MSANTD4Q8NCY6 345 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 AGPAT1Q99943 283 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 TSKSQ9UJT2 592 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 FIS1Q9Y3D6 152 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 BZW2Q9Y6E2 419 aaKnown RBP11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 CELF2O95319 508 aaKnown RBP11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 LCP1P13796 627 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 PPP2R5AQ15172 486 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 CENPPQ6IPU0 288 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 RPS6KC1Q96S38 1066 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 KLF6Q99612 283 aaPredicted RBP11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 MYH2Q9UKX2 1941 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 CTNND1O60716 968 aaKnown RBP11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 KRT10P13645 584 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 GPC5P78333 572 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 NME3Q13232 169 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 TRADDQ15628 312 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 SPDYE2Q495Y8 402 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 MCTP2Q6DN12 878 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 EFCAB12Q6NXP0 572 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 CCDC91Q7Z6B0 441 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 IRF2BP1Q8IU81 584 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 PRPF31Q8WWY3 499 aaKnown RBP11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 KIF12Q96FN5 646 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 CFAP36Q96G28 342 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 AGAP1Q9UPQ3 857 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 CAPN7Q9Y6W3 813 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 ANKRD63C9JTQ0 380 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 PLS3P13797 630 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 APOBEC3FQ8IUX4 373 aaKnown RBP11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 CDHR1Q96JP9 859 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 FBXL5Q9UKA1 691 aa11.54□□□□□ -0.56
TGFBR1-209ENST00000552516 CREB3O43889 395 aa11.53□□□□□ -0.56
TGFBR1-209ENST00000552516 CDH8P55286 799 aa11.53□□□□□ -0.56
TGFBR1-209ENST00000552516 FAXCQ5TGI0 409 aa11.53□□□□□ -0.56
TGFBR1-209ENST00000552516 HHATQ5VTY9 493 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms