RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 IPPQ9Y573 584 aa17.96■□□□□ 0.47
CALCOCO1-220ENST00000552282 PLXNA3P51805 1871 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 ERLIN2O94905 339 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 ALDH2P05091 517 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 CNPP09543 421 aaKnown RBP17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 SRGAP2CP0DJJ0 459 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 XRCC6P12956 609 aaKnown RBP eCLIP17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 ARL2P36404 184 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 AK2P54819 239 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 MBTD1Q05BQ5 628 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 NR5A1Q13285 461 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 TFDP1Q14186 410 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 XKR9Q5GH70 373 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 ZBTB33Q86T24 672 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 HDAC7Q8WUI4 952 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 EIF2AK1Q9BQI3 630 aaKnown RBP17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 CSRNP2Q9H175 543 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 RXFP1Q9HBX9 757 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 BRMS1Q9HCU9 246 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 FAN1Q9Y2M0 1017 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 GIT1Q9Y2X7 761 aa17.95■□□□□ 0.46
CALCOCO1-220ENST00000552282 FAM205CA6NFA0 338 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 PROB1E7EW31 1015 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 ITGA4P13612 1032 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 RARRES1P49788 294 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 CAPSQ13938 189 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 CTTNQ14247 550 aaKnown RBP17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 LONRF3Q496Y0 759 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 CCDC149Q6ZUS6 474 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 C12orf76Q8N812 135 aaPredicted RBP17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 MTMR9Q96QG7 549 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 RPS6KC1Q96S38 1066 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 PHOX2BQ99453 314 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 GBP3Q9H0R5 595 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 TSHZ2Q9NRE2 1034 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 MRPL17Q9NRX2 175 aaKnown RBP17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 CHST7Q9NS84 486 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 DPP7Q9UHL4 492 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 DBR1Q9UK59 544 aaKnown RBP17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 PCDHA12Q9UN75 941 aa17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 MTCL1Q9Y4B5 1905 aaKnown RBP17.94■□□□□ 0.46
CALCOCO1-220ENST00000552282 ARL5CA6NH57 179 aa17.93■□□□□ 0.46
CALCOCO1-220ENST00000552282 ZBTB39O15060 712 aa17.93■□□□□ 0.46
CALCOCO1-220ENST00000552282 GALR2O43603 387 aaPredicted RBP17.93■□□□□ 0.46
CALCOCO1-220ENST00000552282 PDGFBP01127 241 aaPredicted RBP17.93■□□□□ 0.46
CALCOCO1-220ENST00000552282 URODP06132 367 aa17.93■□□□□ 0.46
CALCOCO1-220ENST00000552282 CYP4A11Q02928 519 aa17.93■□□□□ 0.46
CALCOCO1-220ENST00000552282 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
CALCOCO1-220ENST00000552282 OTOP3Q7RTS5 596 aa17.93■□□□□ 0.46
CALCOCO1-220ENST00000552282 TMEM87AQ8NBN3 555 aa17.93■□□□□ 0.46
CALCOCO1-220ENST00000552282 NSUN7Q8NE18 718 aaKnown RBP17.93■□□□□ 0.46
CALCOCO1-220ENST00000552282 FAM193BQ96PV7 902 aaPredicted RBP17.93■□□□□ 0.46
CALCOCO1-220ENST00000552282 EIF2AQ9BY44 585 aaKnown RBP17.93■□□□□ 0.46
CALCOCO1-220ENST00000552282 ZFHX2Q9C0A1 2572 aaPredicted RBP17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 DOCK8Q8NF50 2099 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 MARCH6O60337 910 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 NEMFO60524 1076 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 POMCP01189 267 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 ADH1AP07327 375 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 ARF4P18085 180 aaPredicted RBP17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 SP100P23497 879 aaPredicted RBP17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 CA8P35219 290 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 CLCN5P51795 746 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 DSG1Q02413 1049 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 NCBP1Q09161 790 aaKnown RBP17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 CALCRLQ16602 461 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 ME3Q16798 604 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 KIAA0319Q5VV43 1072 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 TMC5Q6UXY8 1006 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 GSTCDQ8NEC7 633 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 ACSF2Q96CM8 615 aaPredicted RBP17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 PRIMPOLQ96LW4 560 aa17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 TTC12Q9H892 705 aaPredicted RBP17.92■□□□□ 0.46
CALCOCO1-220ENST00000552282 A0A1B0GUA9 196 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 ST18O60284 1047 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 WEE2P0C1S8 567 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 GLRA2P23416 452 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 KLRC2P26717 231 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 MLH1P40692 756 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 GLUD2P49448 558 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 ORC2Q13416 577 aaPredicted RBP17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 FAM187BQ17R55 369 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 CDCA2Q69YH5 1023 aaPredicted RBP17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 KANK3Q6NY19 840 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 ELMSAN1Q6PJG2 1045 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 TPH2Q8IWU9 490 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 HACE1Q8IYU2 909 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 ASAP3Q8TDY4 903 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 GAD1Q99259 594 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 RNF39Q9H2S5 420 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 BMP2KQ9NSY1 1161 aaPredicted RBP17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 FNIP2Q9P278 1114 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 DUSP12Q9UNI6 340 aa17.91■□□□□ 0.46
CALCOCO1-220ENST00000552282 INO80B-WBP1J3KQ70 363 aa17.9■□□□□ 0.46
CALCOCO1-220ENST00000552282 TEX28O15482 410 aa17.9■□□□□ 0.46
CALCOCO1-220ENST00000552282 LARGE1O95461 756 aa17.9■□□□□ 0.46
CALCOCO1-220ENST00000552282 ASGR2P07307 311 aa17.9■□□□□ 0.46
CALCOCO1-220ENST00000552282 SCNN1GP51170 649 aa17.9■□□□□ 0.46
CALCOCO1-220ENST00000552282 GRIK3Q13003 919 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms