RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 PNMA6FA0A0J9YX94 578 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 LNP1A1A4G5 178 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 CSDE1O75534 798 aaKnown RBP12.82□□□□□ -0.36
GPN3-208ENST00000550974 RPL17P18621 184 aaKnown RBP12.82□□□□□ -0.36
GPN3-208ENST00000550974 CCNE1P24864 410 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 AFF1P51825 1210 aaKnown RBP12.82□□□□□ -0.36
GPN3-208ENST00000550974 DSG1Q02413 1049 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 PTGDRQ13258 359 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 SLC35G1Q2M3R5 365 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 PPM1LQ5SGD2 360 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 CKAP2LQ8IYA6 745 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 PANK1Q8TE04 598 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 MAP7D2Q96T17 732 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 TMEM9BQ9NQ34 198 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 MAD2L2Q9UI95 211 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 IGSF10Q6WRI0 2623 aa12.82□□□□□ -0.36
GPN3-208ENST00000550974 SPAARA0A1B0GVQ0 90 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 MEIS2O14770 477 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 MAFGO15525 162 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 CAVIN2O95810 425 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 C1RP00736 705 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 POMCP01189 267 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 SKIP12755 728 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 DARSP14868 501 aaKnown RBP12.81□□□□□ -0.36
GPN3-208ENST00000550974 OR1G1P47890 313 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 CREB5Q02930 508 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 LRRC32Q14392 662 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 FAM160B1Q5W0V3 765 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 PDXDC2PQ6P474 469 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 LRRC71Q8N4P6 559 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 CHCHD4Q8N4Q1 142 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 ELSPBP1Q96BH3 223 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 FAM105AQ9NUU6 356 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 HCFC1R1Q9NWW0 138 aa12.81□□□□□ -0.36
GPN3-208ENST00000550974 BPTFQ12830 3046 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 IGKV6D-21A0A0A0MT36 114 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 PALM3A6NDB9 673 aaPredicted RBP12.8□□□□□ -0.36
GPN3-208ENST00000550974 B4E1Z4 1266 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 ARHGAP6O43182 974 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 ATG7O95352 703 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 C8AP07357 584 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 HNRNPA1P09651 372 aaKnown RBP eCLIP12.8□□□□□ -0.36
GPN3-208ENST00000550974 HOXA6P31267 233 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 SIM1P81133 766 aaPredicted RBP12.8□□□□□ -0.36
GPN3-208ENST00000550974 LIN9Q5TKA1 542 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 EFCAB12Q6NXP0 572 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 RNF168Q8IYW5 571 aaPredicted RBP12.8□□□□□ -0.36
GPN3-208ENST00000550974 SLC39A7Q92504 469 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 IRF7Q92985 503 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 TRMT61BQ9BVS5 477 aaKnown RBP12.8□□□□□ -0.36
GPN3-208ENST00000550974 SLC32A1Q9H598 525 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 CCDC86Q9H6F5 360 aaKnown RBP12.8□□□□□ -0.36
GPN3-208ENST00000550974 RIOX1Q9H6W3 641 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 ZNF334Q9HCZ1 680 aaPredicted RBP12.8□□□□□ -0.36
GPN3-208ENST00000550974 ZNF302Q9NR11 478 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 CHST12Q9NRB3 414 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.8□□□□□ -0.36
GPN3-208ENST00000550974 KCNH7Q9NS40 1196 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 RAXQ9Y2V3 346 aa12.8□□□□□ -0.36
GPN3-208ENST00000550974 MRPS23Q9Y3D9 190 aaKnown RBP12.8□□□□□ -0.36
GPN3-208ENST00000550974 FAM221BA6H8Z2 402 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 DDX39AO00148 427 aaKnown RBP12.79□□□□□ -0.36
GPN3-208ENST00000550974 CDX4O14627 284 aaPredicted RBP12.79□□□□□ -0.36
GPN3-208ENST00000550974 CYTH3O43739 400 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 XYLBO75191 536 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 ATP4AP20648 1035 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 TMOD1P28289 359 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 RDXP35241 583 aaKnown RBP12.79□□□□□ -0.36
GPN3-208ENST00000550974 GPC3P51654 580 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 PABPC1LQ4VXU2 614 aaKnown RBP12.79□□□□□ -0.36
GPN3-208ENST00000550974 IFIT1BQ5T764 474 aaKnown RBP12.79□□□□□ -0.36
GPN3-208ENST00000550974 CCDC60Q8IWA6 550 aaPredicted RBP12.79□□□□□ -0.36
GPN3-208ENST00000550974 NLRP7Q8WX94 980 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 PIK3R5Q8WYR1 880 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 PGBD4Q96DM1 585 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 ZC3H10Q96K80 434 aaKnown RBP12.79□□□□□ -0.36
GPN3-208ENST00000550974 MBOAT7Q96N66 472 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 UBL7Q96S82 380 aaPredicted RBP12.79□□□□□ -0.36
GPN3-208ENST00000550974 TRAIPQ9BWF2 469 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 CHST7Q9NS84 486 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 ZSWIM5Q9P217 1185 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 FNIP2Q9P278 1114 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 FBXW11Q9UKB1 542 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 KCNH3Q9ULD8 1083 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 PIN4Q9Y237 131 aaKnown RBP12.79□□□□□ -0.36
GPN3-208ENST00000550974 NFASCO94856 1347 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 EVPLQ92817 2033 aa12.79□□□□□ -0.36
GPN3-208ENST00000550974 F8W810 466 aa12.78□□□□□ -0.36
GPN3-208ENST00000550974 J3QKU1 62 aa12.78□□□□□ -0.36
GPN3-208ENST00000550974 PIK3CDO00329 1044 aa12.78□□□□□ -0.36
GPN3-208ENST00000550974 KHNYNO15037 678 aaKnown RBP12.78□□□□□ -0.36
GPN3-208ENST00000550974 GDI1P31150 447 aa12.78□□□□□ -0.36
GPN3-208ENST00000550974 PLK5Q496M5 336 aa12.78□□□□□ -0.36
GPN3-208ENST00000550974 SWSAP1Q6NVH7 229 aa12.78□□□□□ -0.36
GPN3-208ENST00000550974 AGMOQ6ZNB7 445 aa12.78□□□□□ -0.36
GPN3-208ENST00000550974 CRELD1Q96HD1 420 aa12.78□□□□□ -0.36
GPN3-208ENST00000550974 SCUBE2Q9NQ36 999 aa12.78□□□□□ -0.36
GPN3-208ENST00000550974 KANSL3Q9P2N6 904 aa12.78□□□□□ -0.36
GPN3-208ENST00000550974 DNMT3BQ9UBC3 853 aaKnown RBP12.78□□□□□ -0.36
GPN3-208ENST00000550974 H0Y626 953 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms