RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 POU5F1BQ06416 359 aa24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 EIF2AK1Q9BQI3 630 aaKnown RBP24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 EIF2AQ9BY44 585 aaKnown RBP24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 RNF39Q9H2S5 420 aa24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 SMOC2Q9H3U7 446 aa24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 MRPL17Q9NRX2 175 aaKnown RBP24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 MARCH5Q9NX47 278 aa24.17■■□□□ 1.46
SMARCC2-210ENST00000550519 EFEMP2O95967 443 aa24.16■■□□□ 1.46
SMARCC2-210ENST00000550519 SOD2P04179 222 aa24.16■■□□□ 1.46
SMARCC2-210ENST00000550519 SSBP05455 408 aaKnown RBP eCLIP24.16■■□□□ 1.46
SMARCC2-210ENST00000550519 AK2P54819 239 aa24.16■■□□□ 1.46
SMARCC2-210ENST00000550519 ANAPC15P60006 121 aa24.16■■□□□ 1.46
SMARCC2-210ENST00000550519 ANKRD1Q15327 319 aa24.16■■□□□ 1.46
SMARCC2-210ENST00000550519 NOTUMQ6P988 496 aa24.16■■□□□ 1.46
SMARCC2-210ENST00000550519 COLGALT2Q8IYK4 626 aa24.16■■□□□ 1.46
SMARCC2-210ENST00000550519 CCDC51Q96ER9 411 aa24.16■■□□□ 1.46
SMARCC2-210ENST00000550519 IRF2BPLQ9H1B7 796 aa24.16■■□□□ 1.46
SMARCC2-210ENST00000550519 PCDHA12Q9UN75 941 aa24.16■■□□□ 1.46
SMARCC2-210ENST00000550519 DSC1Q08554 894 aa24.15■■□□□ 1.46
SMARCC2-210ENST00000550519 RNF168Q8IYW5 571 aaPredicted RBP24.15■■□□□ 1.46
SMARCC2-210ENST00000550519 HERC2P3Q9BVR0 1158 aa24.15■■□□□ 1.46
SMARCC2-210ENST00000550519 CSRNP2Q9H175 543 aa24.15■■□□□ 1.46
SMARCC2-210ENST00000550519 BRMS1Q9HCU9 246 aa24.15■■□□□ 1.46
SMARCC2-210ENST00000550519 ANKEF1Q9NU02 776 aa24.15■■□□□ 1.46
SMARCC2-210ENST00000550519 PRG3Q9Y2Y8 225 aaPredicted RBP24.15■■□□□ 1.46
SMARCC2-210ENST00000550519 ARL5CA6NH57 179 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 DGAT1O75907 488 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 ARL2P36404 184 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 NCBP1Q09161 790 aaKnown RBP24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 TFDP1Q14186 410 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 AMHR2Q16671 573 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 C15orf39Q6ZRI6 1047 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 TAS1R1Q7RTX1 841 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 ASAP3Q8TDY4 903 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 CPB2Q96IY4 423 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 RPS6KC1Q96S38 1066 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 GAD1Q99259 594 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 FAM86C1Q9NVL1 165 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 MIOSQ9NXC5 875 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 HES2Q9Y543 173 aa24.14■■□□□ 1.45
SMARCC2-210ENST00000550519 INO80B-WBP1J3KQ70 363 aa24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 URODP06132 367 aa24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 MLH1P40692 756 aa24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 MBTD1Q05BQ5 628 aa24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 CAPSQ13938 189 aa24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 ME3Q16798 604 aa24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 CCDC149Q6ZUS6 474 aa24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 OTOP3Q7RTS5 596 aa24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 NECAB1Q8N987 351 aa24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 ACSF2Q96CM8 615 aaPredicted RBP24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 NFKBIZQ9BYH8 718 aa24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 TTC12Q9H892 705 aaPredicted RBP24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 SSX2IPQ9Y2D8 614 aa24.13■■□□□ 1.45
SMARCC2-210ENST00000550519 SPDYE4A6NLX3 237 aa24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 C2CD2LO14523 706 aa24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 GALR2O43603 387 aaPredicted RBP24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 OR1G1P47890 313 aa24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 SCNN1GP51170 649 aa24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 CALCRLQ16602 461 aa24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 KIAA0319Q5VV43 1072 aa24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 TMEM105Q8N8V8 129 aa24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 CMASQ8NFW8 434 aaPredicted RBP24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 GTF3C6Q969F1 213 aa24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 ZFP42Q96MM3 310 aa24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 RXFP1Q9HBX9 757 aa24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 GIT1Q9Y2X7 761 aa24.12■■□□□ 1.45
SMARCC2-210ENST00000550519 ZFHX2Q9C0A1 2572 aaPredicted RBP24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 BTBD18B2RXH4 712 aa24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 H0Y858 1186 aa24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 WNT7AO00755 349 aa24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 TEX28O15482 410 aa24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 LARGE1O95461 756 aa24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 ADH1AP07327 375 aa24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 ARF4P18085 180 aaPredicted RBP24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 GLRA2P23416 452 aa24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 RARRES1P49788 294 aa24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 NSUN7Q8NE18 718 aaKnown RBP24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 ATOH1Q92858 354 aaPredicted RBP24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 MTMR9Q96QG7 549 aa24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 MAN1C1Q9NR34 630 aa24.11■■□□□ 1.45
SMARCC2-210ENST00000550519 ARID2Q68CP9 1835 aa24.1■■□□□ 1.45
SMARCC2-210ENST00000550519 USP34Q70CQ2 3546 aa24.1■■□□□ 1.45
SMARCC2-210ENST00000550519 NEMFO60524 1076 aa24.1■■□□□ 1.45
SMARCC2-210ENST00000550519 GLUD2P49448 558 aa24.1■■□□□ 1.45
SMARCC2-210ENST00000550519 DSG1Q02413 1049 aa24.1■■□□□ 1.45
SMARCC2-210ENST00000550519 GSTCDQ8NEC7 633 aa24.1■■□□□ 1.45
SMARCC2-210ENST00000550519 RHOBTB2Q9BYZ6 727 aa24.1■■□□□ 1.45
SMARCC2-210ENST00000550519 NXF3Q9H4D5 531 aaKnown RBP24.1■■□□□ 1.45
SMARCC2-210ENST00000550519 CHST7Q9NS84 486 aa24.1■■□□□ 1.45
SMARCC2-210ENST00000550519 DENND4AQ7Z401 1863 aa24.1■■□□□ 1.45
SMARCC2-210ENST00000550519 F8W810 466 aa24.09■■□□□ 1.45
SMARCC2-210ENST00000550519 ST18O60284 1047 aa24.09■■□□□ 1.45
SMARCC2-210ENST00000550519 XRCC6P12956 609 aaKnown RBP eCLIP24.09■■□□□ 1.45
SMARCC2-210ENST00000550519 TXKP42681 527 aa24.09■■□□□ 1.45
SMARCC2-210ENST00000550519 ASTLQ6HA08 431 aaPredicted RBP24.09■■□□□ 1.45
SMARCC2-210ENST00000550519 DIS3L2Q8IYB7 885 aaKnown RBP24.09■■□□□ 1.45
SMARCC2-210ENST00000550519 PIGOQ8TEQ8 1089 aa24.09■■□□□ 1.45
SMARCC2-210ENST00000550519 TRIM6Q9C030 488 aaPredicted RBP24.09■■□□□ 1.45
SMARCC2-210ENST00000550519 DPP7Q9UHL4 492 aa24.09■■□□□ 1.45
SMARCC2-210ENST00000550519 B4GALT5O43286 388 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms