RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 STOML1Q9UBI4 398 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 USH1CQ9Y6N9 552 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 XRN1Q8IZH2 1706 aaKnown RBP10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 PPIP5K2O43314 1243 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 MAP3K7O43318 606 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 ANP32DO95626 131 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 CDR2Q01850 454 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 MTM1Q13496 603 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 KRT81Q14533 505 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 ZNF662Q6ZS27 426 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 SPATA24Q86W54 205 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 IQCKQ8N0W5 287 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 C3orf20Q8ND61 904 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 ATP2A3Q93084 1043 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 BTBD6Q96KE9 485 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 DNAI2Q9GZS0 605 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 L3MBTL1Q9Y468 752 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 PCDHGC5Q9Y5F6 944 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 RICTORQ6R327 1708 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 PI4K2BG5E9Z4 385 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 GOLGA8RI6L899 631 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 IPO5O00410 1097 aaKnown RBP10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 TRAPPC3O43617 180 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 SKAP2O75563 359 aaPredicted RBP10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 POLR2BP30876 1174 aaKnown RBP10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 IFI35P80217 286 aaPredicted RBP10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 KCNMA1Q12791 1236 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 ITGB3BPQ13352 177 aaPredicted RBP10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 MAP7D1Q3KQU3 841 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 TTC16Q8NEE8 873 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 COA1Q9GZY4 146 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 HAUS5O94927 633 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 EPC2Q52LR7 807 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 KRT39Q6A163 491 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 TMEM270Q6UE05 265 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 HIPK4Q8NE63 616 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 RBM15Q96T37 977 aaKnown RBP eCLIP10.9□□□□□ -0.663e-7■■■□□ 16.4
SMARCC2-209ENST00000550164 RUSC1Q9BVN2 902 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 ZWILCHQ9H900 591 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 PPARGC1AQ9UBK2 798 aaKnown RBP10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 PPP1R9AQ9ULJ8 1098 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 GINS2Q9Y248 185 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 PSMC6P62333 389 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 PDIA2Q13087 525 aaKnown RBP10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 LRRC55Q6ZSA7 311 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 MIGA2Q7L4E1 593 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 HAUS6Q7Z4H7 955 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 PRPF38AQ8NAV1 312 aaKnown RBP10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 ATL2Q8NHH9 583 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 PPP4R1Q8TF05 950 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 ZKSCAN4Q969J2 545 aaPredicted RBP10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 FAM213AQ9BRX8 229 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 TRABDQ9H4I3 376 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 SALL4Q9UJQ4 1053 aa10.9□□□□□ -0.66
SMARCC2-209ENST00000550164 TJP3O95049 919 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 TMEM191BP0C7N4 346 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 CCND1P24385 295 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 COILP38432 576 aaPredicted RBP10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 CRKP46108 304 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 ITGA8P53708 1063 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 COPS2P61201 443 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 DNAJC3Q13217 504 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 ALCAMQ13740 583 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 LMBRD2Q68DH5 695 aaPredicted RBP10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 MCF2L2Q86YR7 1114 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 LARGE2Q8N3Y3 721 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 MORC4Q8TE76 937 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 ATG4AQ8WYN0 398 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 GRAMD1AQ96CP6 724 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 STAMBPL1Q96FJ0 436 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 UBXN6Q9BZV1 441 aa10.9□□□□□ -0.67
SMARCC2-209ENST00000550164 DENND3A2RUS2 1198 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 UBAP1LF5GYI3 381 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 H0YIN7 160 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 TLR3O15455 904 aaKnown RBP10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 ITIH2P19823 946 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 RFX1P22670 979 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 SMARCA1P28370 1054 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 MKRN3Q13064 507 aaKnown RBP10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 NR1H3Q13133 447 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 GIT2Q14161 759 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 COL23A1Q86Y22 540 aaPredicted RBP10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 SLC13A5Q86YT5 568 aaPredicted RBP10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 DTX3LQ8TDB6 740 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 FAM81BQ96LP2 452 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 TDRD3Q9H7E2 651 aaKnown RBP10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 BATF3Q9NR55 127 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 NXF1Q9UBU9 619 aaKnown RBP10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 DDX3XO00571 662 aaKnown RBP eCLIP10.89□□□□□ -0.677e-15■■□□□ 14
SMARCC2-209ENST00000550164 NQO1P15559 274 aaKnown RBP10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 STAT4Q14765 748 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 CCDC14Q49A88 953 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 MTERF2Q49AM1 385 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 CC2D2BQ6DHV5 1058 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 SLC30A10Q6XR72 485 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 ANKMY2Q8IV38 441 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 C4orf32Q8N8J7 132 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 SMC1BQ8NDV3 1235 aa10.89□□□□□ -0.67
SMARCC2-209ENST00000550164 MIPOL1Q8TD10 442 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms