RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 MAPTP10636 758 aaKnown RBP10.55□□□□□ -0.72
RAB5B-205ENST00000549034 FGFR1P11362 822 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 ITGA4P13612 1032 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 MATR3P43243 847 aaKnown RBP eCLIP10.55□□□□□ -0.72
RAB5B-205ENST00000549034 GATMP50440 423 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 FXR1P51114 621 aaKnown RBP eCLIP10.55□□□□□ -0.72
RAB5B-205ENST00000549034 RAB27AP51159 221 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 HTRA4P83105 476 aaPredicted RBP10.55□□□□□ -0.72
RAB5B-205ENST00000549034 CUL4BQ13620 913 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 BTG3Q14201 252 aaPredicted RBP10.55□□□□□ -0.72
RAB5B-205ENST00000549034 PAN2Q504Q3 1202 aaKnown RBP10.55□□□□□ -0.72
RAB5B-205ENST00000549034 ZC2HC1CQ53FD0 456 aaPredicted RBP10.55□□□□□ -0.72
RAB5B-205ENST00000549034 ATF7IP2Q5U623 682 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 SLC27A1Q6PCB7 646 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 KRBA2Q6ZNG9 492 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 TAS1R3Q7RTX0 852 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 ZNF720Q7Z2F6 126 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 ZBTB33Q86T24 672 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 ABI1Q8IZP0 508 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 CRIPAKQ8N1N5 446 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 SLC17A8Q8NDX2 589 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 LPPQ93052 612 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 ZNF689Q96CS4 500 aaPredicted RBP10.55□□□□□ -0.72
RAB5B-205ENST00000549034 CCDC51Q96ER9 411 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 KIF12Q96FN5 646 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 FAM161BQ96MY7 647 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 ACO2Q99798 780 aaKnown RBP10.55□□□□□ -0.72
RAB5B-205ENST00000549034 ADPGKQ9BRR6 497 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 TRAIPQ9BWF2 469 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 APOL6Q9BWW8 343 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 MRPL4Q9BYD3 311 aaKnown RBP10.55□□□□□ -0.72
RAB5B-205ENST00000549034 TRIM9Q9C026 710 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 CERS4Q9HA82 394 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 RTN4Q9NQC3 1192 aaKnown RBP10.55□□□□□ -0.72
RAB5B-205ENST00000549034 SEL1LQ9UBV2 794 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 TBX20Q9UMR3 447 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 PHLPP2Q6ZVD8 1323 aa10.55□□□□□ -0.72
RAB5B-205ENST00000549034 LCHNA4D1U4 455 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 HOXA2O43364 376 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 GTPBP6O43824 516 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-205ENST00000549034 GCNT3O95395 438 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 EDN1P05305 212 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 PYGBP11216 843 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 GTF2BQ00403 316 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 COASYQ13057 564 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 MYO9BQ13459 2157 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 SPOUT1Q5T280 376 aaKnown RBP10.54□□□□□ -0.72
RAB5B-205ENST00000549034 ZNF697Q5TEC3 545 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 EEF1DP3Q658K8 133 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 PPP2R2DQ66LE6 453 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 KANK3Q6NY19 840 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 UNC13DQ70J99 1090 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 MRPL10Q7Z7H8 261 aaKnown RBP10.54□□□□□ -0.72
RAB5B-205ENST00000549034 ZNF598Q86UK7 904 aaKnown RBP10.54□□□□□ -0.72
RAB5B-205ENST00000549034 FMR1NBQ8N0W7 255 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-205ENST00000549034 FIBCD1Q8N539 461 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 SMG8Q8ND04 991 aaKnown RBP10.54□□□□□ -0.72
RAB5B-205ENST00000549034 ENGASEQ8NFI3 743 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 SP7Q8TDD2 431 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-205ENST00000549034 HELQQ8TDG4 1101 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 HPS3Q969F9 1004 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 BICD1Q96G01 975 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 CCDC34Q96HJ3 373 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 ZBTB45Q96K62 511 aaPredicted RBP10.54□□□□□ -0.72
RAB5B-205ENST00000549034 FIZ1Q96SL8 496 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 SEMA6BQ9H3T3 888 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 PDZD7Q9H5P4 517 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 ZNF576Q9H609 170 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 PARP2Q9UGN5 583 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 TNFSF13BQ9Y275 285 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 HES2Q9Y543 173 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 IPPQ9Y573 584 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 PCDHB13Q9Y5F0 798 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 TRIOBPQ9H2D6 2365 aa10.54□□□□□ -0.72
RAB5B-205ENST00000549034 PVALEFA0A1B0GWK0 134 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 FRMD3A2A2Y4 597 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 LINC01553A4QN01 128 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 MEIS3P2A8K0S8 358 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 OFD1O75665 1012 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 PRPF6O94906 941 aaKnown RBP10.53□□□□□ -0.72
RAB5B-205ENST00000549034 MYBP10242 640 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 AKAP5P24588 427 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 ABCD1P33897 745 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 LIG4P49917 911 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 CLCN6P51797 869 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 TAP1Q03518 808 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 FAM160A1Q05DH4 1040 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 SNW1Q13573 536 aaKnown RBP10.53□□□□□ -0.72
RAB5B-205ENST00000549034 CNNM4Q6P4Q7 775 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 APBB1IPQ7Z5R6 666 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-205ENST00000549034 HACE1Q8IYU2 909 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 CASD1Q96PB1 797 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 TMEM117Q9H0C3 514 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 UBN1Q9NPG3 1134 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 TYW1Q9NV66 732 aaKnown RBP10.53□□□□□ -0.72
RAB5B-205ENST00000549034 INPP5FQ9Y2H2 1132 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 CNTNAP2Q9UHC6 1331 aa10.53□□□□□ -0.72
RAB5B-205ENST00000549034 FNDC1Q4ZHG4 1894 aaPredicted RBP10.53□□□□□ -0.72
RAB5B-205ENST00000549034 CLDN3O15551 220 aa10.52□□□□□ -0.73
RAB5B-205ENST00000549034 NR1I2O75469 434 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms