RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 AK2P54819 239 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 LILRA6Q6PI73 481 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 DCLRE1AQ6PJP8 1040 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 ANO5Q75V66 913 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 MIER3Q7Z3K6 550 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 KSR1Q8IVT5 923 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 PJA1Q8NG27 643 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 DDX23Q9BUQ8 820 aaKnown RBP15.17■□□□□ 0.02
CDX2-202ENST00000548877 ANO2Q9NQ90 1003 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 FNIP2Q9P278 1114 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 PPME1Q9Y570 386 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 TDRD15B5MCY1 1934 aaKnown RBP15.17■□□□□ 0.02
CDX2-202ENST00000548877 MYH15Q9Y2K3 1946 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 PATJQ8NI35 1801 aa15.17■□□□□ 0.02
CDX2-202ENST00000548877 C2CD2LO14523 706 aa15.16■□□□□ 0.02
CDX2-202ENST00000548877 POMCP01189 267 aa15.16■□□□□ 0.02
CDX2-202ENST00000548877 HMGB1P09429 215 aaKnown RBP15.16■□□□□ 0.02
CDX2-202ENST00000548877 ADCK5Q3MIX3 580 aa15.16■□□□□ 0.02
CDX2-202ENST00000548877 DCLK2Q8N568 766 aa15.16■□□□□ 0.02
CDX2-202ENST00000548877 GPR161Q8N6U8 529 aaKnown RBP15.16■□□□□ 0.02
CDX2-202ENST00000548877 CCDC148Q8NFR7 591 aa15.16■□□□□ 0.02
CDX2-202ENST00000548877 SHDQ96IW2 340 aa15.16■□□□□ 0.02
CDX2-202ENST00000548877 NLRP4Q96MN2 994 aa15.16■□□□□ 0.02
CDX2-202ENST00000548877 MBOAT7Q96N66 472 aa15.16■□□□□ 0.02
CDX2-202ENST00000548877 OSBPL6Q9BZF3 934 aa15.16■□□□□ 0.02
CDX2-202ENST00000548877 PRKD2Q9BZL6 878 aa15.16■□□□□ 0.02
CDX2-202ENST00000548877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDX2-202ENST00000548877 FBXO4Q9UKT5 387 aa15.16■□□□□ 0.02
CDX2-202ENST00000548877 COL4A3BPQ9Y5P4 624 aa15.16■□□□□ 0.02
CDX2-202ENST00000548877 POTEMA6NI47 508 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 SPTLC1O15269 473 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 KINO60870 393 aaKnown RBP15.15■□□□□ 0.02
CDX2-202ENST00000548877 SDHBP21912 280 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 PSMC5P62195 406 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 KRT32Q14532 448 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 PCBP1Q15365 356 aaKnown RBP eCLIP15.15■□□□□ 0.02
CDX2-202ENST00000548877 NTRK3Q16288 839 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 SPECC1Q5M775 1068 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 MOXD1Q6UVY6 613 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 EXOC8Q8IYI6 725 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 RASEFQ8IZ41 740 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 FBXL16Q8N461 479 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 SMG8Q8ND04 991 aaKnown RBP15.15■□□□□ 0.02
CDX2-202ENST00000548877 SH2D3AQ9BRG2 576 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 RNF26Q9BY78 433 aaPredicted RBP15.15■□□□□ 0.02
CDX2-202ENST00000548877 C22orf23Q9BZE7 217 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 DHX33Q9H6R0 707 aaKnown RBP15.15■□□□□ 0.02
CDX2-202ENST00000548877 MINDY3Q9H8M7 445 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 NUMBLQ9Y6R0 609 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 ACACBO00763 2458 aa15.15■□□□□ 0.02
CDX2-202ENST00000548877 DDX11L8A8MPP1 907 aa15.14■□□□□ 0.01
CDX2-202ENST00000548877 TGM5O43548 720 aa15.14■□□□□ 0.01
CDX2-202ENST00000548877 GAS2O43903 313 aaKnown RBP15.14■□□□□ 0.01
CDX2-202ENST00000548877 RSPO4Q2I0M5 234 aaPredicted RBP15.14■□□□□ 0.01
CDX2-202ENST00000548877 RSPO2Q6UXX9 243 aaPredicted RBP15.14■□□□□ 0.01
CDX2-202ENST00000548877 ETNPPLQ8TBG4 499 aa15.14■□□□□ 0.01
CDX2-202ENST00000548877 NELL1Q92832 810 aa15.14■□□□□ 0.01
CDX2-202ENST00000548877 GJA10Q969M2 543 aa15.14■□□□□ 0.01
CDX2-202ENST00000548877 CCDC51Q96ER9 411 aa15.14■□□□□ 0.01
CDX2-202ENST00000548877 HINFPQ9BQA5 517 aa15.14■□□□□ 0.01
CDX2-202ENST00000548877 FOXQ1Q9C009 403 aa15.14■□□□□ 0.01
CDX2-202ENST00000548877 SH3GLB2Q9NR46 395 aa15.14■□□□□ 0.01
CDX2-202ENST00000548877 PRG3Q9Y2Y8 225 aaPredicted RBP15.14■□□□□ 0.01
CDX2-202ENST00000548877 KANSL1LA0AUZ9 987 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 ARL5CA6NH57 179 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 ASAP2O43150 1006 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 ZMYND10O75800 440 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 ITGA4P13612 1032 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 AXLP30530 894 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 MAGEA9P43362 315 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 OR1G1P47890 313 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 CREMQ03060 361 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 PRKCQQ04759 706 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 VARS2Q5ST30 1063 aaKnown RBP15.13■□□□□ 0.01
CDX2-202ENST00000548877 ZBTB44Q8NCP5 570 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 TBCKQ8TEA7 893 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 PRPF31Q8WWY3 499 aaKnown RBP15.13■□□□□ 0.01
CDX2-202ENST00000548877 PSPC1Q8WXF1 523 aaKnown RBP15.13■□□□□ 0.01
CDX2-202ENST00000548877 SLC7A3Q8WY07 619 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 PHKBQ93100 1093 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 CNTNAP3BQ96NU0 1288 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 COLEC11Q9BWP8 271 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 CNTNAP3Q9BZ76 1288 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 PIDD1Q9HB75 910 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 IPPQ9Y573 584 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 PCDHGA2Q9Y5H1 932 aa15.13■□□□□ 0.01
CDX2-202ENST00000548877 ZMYM2Q9UBW7 1377 aa15.12■□□□□ 0.01
CDX2-202ENST00000548877 M0R2N6 131 aa15.12■□□□□ 0.01
CDX2-202ENST00000548877 DKC1O60832 514 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDX2-202ENST00000548877 LILRB5O75023 590 aa15.12■□□□□ 0.01
CDX2-202ENST00000548877 IFNAR1P17181 557 aa15.12■□□□□ 0.01
CDX2-202ENST00000548877 GPC5P78333 572 aa15.12■□□□□ 0.01
CDX2-202ENST00000548877 LAMTOR4Q0VGL1 99 aa15.12■□□□□ 0.01
CDX2-202ENST00000548877 USP41Q3LFD5 358 aa15.12■□□□□ 0.01
CDX2-202ENST00000548877 GET4Q7L5D6 327 aaPredicted RBP15.12■□□□□ 0.01
CDX2-202ENST00000548877 PALB2Q86YC2 1186 aa15.12■□□□□ 0.01
CDX2-202ENST00000548877 IFNLR1Q8IU57 520 aaPredicted RBP15.12■□□□□ 0.01
CDX2-202ENST00000548877 GAD1Q99259 594 aa15.12■□□□□ 0.01
CDX2-202ENST00000548877 RPP25Q9BUL9 199 aaKnown RBP15.12■□□□□ 0.01
CDX2-202ENST00000548877 AGXT2Q9BYV1 514 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms