RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 TATDN2Q93075 761 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 TRIM7Q9C029 511 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 C10orf88Q9H8K7 445 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
CACNB3-209ENST00000548860 GLI3P10071 1580 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 TCRBV7S2A1N4TA0A589 114 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 LRRD1A4D1F6 860 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 SGK1O00141 431 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 TGFB1I1O43294 461 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 QARSP47897 775 aaKnown RBP15.2■□□□□ 0.02
CACNB3-209ENST00000548860 TRAF1Q13077 416 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 TRPC3Q13507 836 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 USP37Q86T82 979 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 ALG3Q92685 438 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 PCSK1NQ9UHG2 260 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 AKAP11Q9UKA4 1901 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 ADAMTS7Q9UKP4 1686 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 AARSP49588 968 aaKnown RBP eCLIP15.2■□□□□ 0.02
CACNB3-209ENST00000548860 RWDD2BP57060 319 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 IRX4P78413 519 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 KRT17Q04695 432 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 BRDTQ58F21 947 aaPredicted RBP15.2■□□□□ 0.02
CACNB3-209ENST00000548860 ZNF720Q7Z2F6 126 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 TAS1R2Q8TE23 839 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 SEC16BQ96JE7 1060 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 DDX23Q9BUQ8 820 aaKnown RBP15.2■□□□□ 0.02
CACNB3-209ENST00000548860 AIPL1Q9NZN9 384 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 CTNNAL1Q9UBT7 734 aa15.2■□□□□ 0.02
CACNB3-209ENST00000548860 LOC102724159A0A0B4J2E5 919 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 TCP11X1B4DZS4 312 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 BAATQ14032 418 aaPredicted RBP15.19■□□□□ 0.02
CACNB3-209ENST00000548860 PWP2Q15269 919 aaKnown RBP15.19■□□□□ 0.02
CACNB3-209ENST00000548860 RFX8Q6ZV50 586 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 ANKRD35Q8N283 1001 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 EXOC7Q9UPT5 735 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 PYGMP11217 842 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 KRT10P13645 584 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 SCP2P22307 547 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 NT5DC3Q86UY8 548 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 ANKMY2Q8IV38 441 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 FGFR1OP2Q9NVK5 253 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 ZHX2Q9Y6X8 837 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 BRD2P25440 801 aaKnown RBP15.19■□□□□ 0.02
CACNB3-209ENST00000548860 PSMC4P43686 418 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 QPCTQ16769 361 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 TAOK1Q7L7X3 1001 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 OTOP1Q7RTM1 612 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 CCDC33Q8N5R6 958 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 ERP44Q9BS26 406 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 PICK1Q9NRD5 415 aa15.19■□□□□ 0.02
CACNB3-209ENST00000548860 SYNJ2BP-COX16A0A087WUM0 186 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 CSDE1O75534 798 aaKnown RBP15.18■□□□□ 0.02
CACNB3-209ENST00000548860 CDC25CP30307 473 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 MTMR2Q13614 643 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 SNRNP35Q16560 246 aaKnown RBP15.18■□□□□ 0.02
CACNB3-209ENST00000548860 CDO1Q16878 200 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 SH3BP5LQ7L8J4 393 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 C4orf33Q8N1A6 199 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 FBF1Q8TES7 1133 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 COX16Q9P0S2 106 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 INTUQ9ULD6 942 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 NID2Q14112 1375 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 BRAFP15056 766 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 SREBF1P36956 1147 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 LIN9Q5TKA1 542 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 HHIPL2Q6UWX4 724 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 LRRC34Q8IZ02 419 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 ZNF526Q8TF50 670 aaPredicted RBP15.18■□□□□ 0.02
CACNB3-209ENST00000548860 KLHL29Q96CT2 875 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 SAYSD1Q9NPB0 183 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 HOMER3Q9NSC5 361 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 ADAM22Q9P0K1 906 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 TRPC6Q9Y210 931 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 PKD1L3Q7Z443 1732 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 P4HBP07237 508 aaKnown RBP15.18■□□□□ 0.02
CACNB3-209ENST00000548860 PEX19P40855 299 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 RPS6P62753 249 aaKnown RBP15.18■□□□□ 0.02
CACNB3-209ENST00000548860 RASA3Q14644 834 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 HHATQ5VTY9 493 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 KCNMB3Q9NPA1 279 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 MYH6P13533 1939 aa15.18■□□□□ 0.02
CACNB3-209ENST00000548860 PRLRP16471 622 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 CCDC6Q16204 474 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 SMTNL2Q2TAL5 461 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 SAMD7Q7Z3H4 446 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 CALN1Q9BXU9 219 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 DCTN4Q9UJW0 460 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 SLIT2O94813 1529 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 HSPA1LP34931 641 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 GABPAQ06546 454 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 SNCBQ16143 134 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 UBXN6Q9BZV1 441 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 PITPNM2Q9BZ72 1349 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 MXRA7P84157 204 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 EN1Q05925 392 aaPredicted RBP15.17■□□□□ 0.02
CACNB3-209ENST00000548860 CCDC91Q7Z6B0 441 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 AKT1S1Q96B36 256 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 CHMP6Q96FZ7 201 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 TMEM206Q9H813 350 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 TMBIM4Q9HC24 238 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms