RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 ZNF280CQ8ND82 737 aa16.77■□□□□ 0.27
BRF1-212ENST00000547562 CCDC26Q8TAB7 109 aa16.77■□□□□ 0.27
BRF1-212ENST00000547562 KIFAP3Q92845 792 aa16.77■□□□□ 0.27
BRF1-212ENST00000547562 SAAL1Q96ER3 474 aa16.77■□□□□ 0.27
BRF1-212ENST00000547562 AS3MTQ9HBK9 375 aa16.77■□□□□ 0.27
BRF1-212ENST00000547562 KMT5AQ9NQR1 393 aa16.77■□□□□ 0.27
BRF1-212ENST00000547562 PFASO15067 1338 aa16.77■□□□□ 0.27
BRF1-212ENST00000547562 USP8P40818 1118 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 TCEAL1Q15170 157 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 EPS8L1Q8TE68 723 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 PARD3BQ8TEW8 1205 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 SPIRE2Q8WWL2 714 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 BSNDQ8WZ55 320 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 ZKSCAN4Q969J2 545 aaPredicted RBP16.76■□□□□ 0.27
BRF1-212ENST00000547562 CEP170P1Q96L14 293 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 RNPC3Q96LT9 517 aaKnown RBP16.76■□□□□ 0.27
BRF1-212ENST00000547562 KREMEN1Q96MU8 473 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 NTPCRQ9BSD7 190 aaKnown RBP16.76■□□□□ 0.27
BRF1-212ENST00000547562 GABBR1Q9UBS5 961 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 CNOT7Q9UIV1 285 aaKnown RBP16.76■□□□□ 0.27
BRF1-212ENST00000547562 ZNF112Q9UJU3 913 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 NOCTQ9UK39 431 aaKnown RBP16.76■□□□□ 0.27
BRF1-212ENST00000547562 ZNF862O60290 1169 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 RTN2O75298 545 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 SGPL1O95470 568 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 KCNA2P16389 499 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 PTPRAP18433 802 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 OAZ1P54368 228 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 KRT39Q6A163 491 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 C11orf63Q6NUN7 778 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 DDX42Q86XP3 938 aaKnown RBP eCLIP16.76■□□□□ 0.27
BRF1-212ENST00000547562 PPM1KQ8N3J5 372 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 PROCA1Q8NCQ7 364 aaPredicted RBP16.76■□□□□ 0.27
BRF1-212ENST00000547562 SEMA4DQ92854 862 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 CCDC127Q96BQ5 260 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 C17orf75Q9HAS0 396 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 CTTNBP2NLQ9P2B4 639 aa16.76■□□□□ 0.27
BRF1-212ENST00000547562 MFAP3P55082 362 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 GPC5P78333 572 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 NOP9Q86U38 636 aaKnown RBP16.75■□□□□ 0.27
BRF1-212ENST00000547562 NSUN6Q8TEA1 469 aaKnown RBP16.75■□□□□ 0.27
BRF1-212ENST00000547562 SEC14L1Q92503 715 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 SHC3Q92529 594 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 ATP6V0A1Q93050 837 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 NAP1L3Q99457 506 aaPredicted RBP16.75■□□□□ 0.27
BRF1-212ENST00000547562 TMEM8AQ9HCN3 771 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 PICK1Q9NRD5 415 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 ZNF214Q9UL59 606 aaPredicted RBP16.75■□□□□ 0.27
BRF1-212ENST00000547562 ADAMTS5Q9UNA0 930 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 COQ4Q9Y3A0 265 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 ALG6Q9Y672 507 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 TTI1O43156 1089 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 RGS20O76081 388 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 STBD1O95210 358 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 GZMAP12544 262 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 CHRNB2P17787 502 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 DSG3P32926 999 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 POU5F1Q01860 360 aaKnown RBP16.75■□□□□ 0.27
BRF1-212ENST00000547562 SLC39A4Q6P5W5 647 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 FOXR1Q6PIV2 292 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 FBXL18Q96ME1 805 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 WRNIP1Q96S55 665 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 PCDHB18PQ96TA0 734 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 CAPS2Q9BXY5 557 aa16.75■□□□□ 0.27
BRF1-212ENST00000547562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.75■□□□□ 0.27
BRF1-212ENST00000547562 DKC1O60832 514 aaKnown RBP eCLIP16.74■□□□□ 0.27
BRF1-212ENST00000547562 IRAK1P51617 712 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 GPC3P51654 580 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 HMGCS2P54868 508 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 SOX10P56693 466 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 PRPF4BQ13523 1007 aaKnown RBP16.74■□□□□ 0.27
BRF1-212ENST00000547562 TMC2Q8TDI7 906 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 ALG3Q92685 438 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 C12orf42Q96LP6 360 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 MFSD14AQ96MC6 490 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 POP1Q99575 1024 aaKnown RBP16.74■□□□□ 0.27
BRF1-212ENST00000547562 NEUROG2Q9H2A3 272 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 NR2E1Q9Y466 385 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 GJA3Q9Y6H8 435 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 CYP26A1O43174 497 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 DAPK3O43293 454 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 PPFIA4O75335 1185 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 PSAPP07602 524 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 PTENP60484 403 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 SKOR1P84550 965 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 CLUL1Q15846 466 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 NAA35Q5VZE5 725 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 SLC47A2Q86VL8 602 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 LRRC45Q96CN5 670 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 CELF4Q9BZC1 486 aaKnown RBP16.74■□□□□ 0.27
BRF1-212ENST00000547562 JPH1Q9HDC5 661 aaPredicted RBP16.74■□□□□ 0.27
BRF1-212ENST00000547562 PLAAQ9Y263 795 aa16.74■□□□□ 0.27
BRF1-212ENST00000547562 ADGRA3Q8IWK6 1321 aa16.73■□□□□ 0.27
BRF1-212ENST00000547562 MIF4GDA9UHW6 222 aaKnown RBP16.73■□□□□ 0.27
BRF1-212ENST00000547562 TULP1O00294 542 aaPredicted RBP16.73■□□□□ 0.27
BRF1-212ENST00000547562 DGAT1O75907 488 aa16.73■□□□□ 0.27
BRF1-212ENST00000547562 TMEM132BQ14DG7 1078 aa16.73■□□□□ 0.27
BRF1-212ENST00000547562 PPP2R5EQ16537 467 aa16.73■□□□□ 0.27
BRF1-212ENST00000547562 KCTD16Q68DU8 428 aa16.73■□□□□ 0.27
BRF1-212ENST00000547562 SWSAP1Q6NVH7 229 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms