RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 ELOA2Q8IYF1 753 aaPredicted RBP22.83■■□□□ 1.25
SCARB1-211ENST00000546215 TMEM161AQ9NX61 479 aa22.83■■□□□ 1.25
SCARB1-211ENST00000546215 TNFSF13BQ9Y275 285 aa22.83■■□□□ 1.25
SCARB1-211ENST00000546215 PCDHB2Q9Y5E7 798 aa22.83■■□□□ 1.25
SCARB1-211ENST00000546215 N4BP3O15049 544 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 GCNT3O95395 438 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 RPN1P04843 607 aaKnown RBP22.82■■□□□ 1.24
SCARB1-211ENST00000546215 STAG3L1P0CL83 205 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 MYBP10242 640 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 SKIP12755 728 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 IBSPP21815 317 aaPredicted RBP22.82■■□□□ 1.24
SCARB1-211ENST00000546215 RAB27AP51159 221 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 SMAD3P84022 425 aaKnown RBP22.82■■□□□ 1.24
SCARB1-211ENST00000546215 KMT5BQ4FZB7 885 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 FAM26FQ5R3K3 315 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 EEF1DP3Q658K8 133 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 MAP4K3Q8IVH8 894 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 GLIS3Q8NEA6 775 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 PTPRHQ9HD43 1115 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 RNF216Q9NWF9 866 aaPredicted RBP22.82■■□□□ 1.24
SCARB1-211ENST00000546215 PCDHB13Q9Y5F0 798 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 CHD9Q3L8U1 2897 aa22.82■■□□□ 1.24
SCARB1-211ENST00000546215 GOLGA6L22H0YM25 854 aa22.81■■□□□ 1.24
SCARB1-211ENST00000546215 EOMESO95936 686 aa22.81■■□□□ 1.24
SCARB1-211ENST00000546215 PBX2P40425 430 aa22.81■■□□□ 1.24
SCARB1-211ENST00000546215 HTRA4P83105 476 aaPredicted RBP22.81■■□□□ 1.24
SCARB1-211ENST00000546215 PNOCQ13519 176 aa22.81■■□□□ 1.24
SCARB1-211ENST00000546215 TMEM132AQ24JP5 1023 aa22.81■■□□□ 1.24
SCARB1-211ENST00000546215 HABP4Q5JVS0 413 aaKnown RBP22.81■■□□□ 1.24
SCARB1-211ENST00000546215 MRPL10Q7Z7H8 261 aaKnown RBP22.81■■□□□ 1.24
SCARB1-211ENST00000546215 SMG8Q8ND04 991 aaKnown RBP22.81■■□□□ 1.24
SCARB1-211ENST00000546215 HVCN1Q96D96 273 aa22.81■■□□□ 1.24
SCARB1-211ENST00000546215 RAD9AQ99638 391 aa22.81■■□□□ 1.24
SCARB1-211ENST00000546215 ZBED2Q9BTP6 218 aa22.81■■□□□ 1.24
SCARB1-211ENST00000546215 PBX4Q9BYU1 374 aa22.81■■□□□ 1.24
SCARB1-211ENST00000546215 LRFN2Q9ULH4 789 aa22.81■■□□□ 1.24
SCARB1-211ENST00000546215 GBF1Q92538 1859 aa22.81■■□□□ 1.24
SCARB1-211ENST00000546215 TLL1O43897 1013 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 DGKIO75912 1065 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 PIGRP01833 764 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 PROZP22891 400 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 KCNA1Q09470 495 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 ALCAMQ13740 583 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 ZPBP2Q6X784 338 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 RC3H2Q9HBD1 1191 aaKnown RBP22.8■■□□□ 1.24
SCARB1-211ENST00000546215 IPPQ9Y573 584 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 PCDHA11Q9Y5I1 949 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 ABLIM1O14639 778 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 NPTXRO95502 500 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 L1TD1Q5T7N2 865 aaKnown RBP22.8■■□□□ 1.24
SCARB1-211ENST00000546215 EPM2AIP1Q7L775 607 aaPredicted RBP22.8■■□□□ 1.24
SCARB1-211ENST00000546215 ZNF689Q96CS4 500 aaPredicted RBP22.8■■□□□ 1.24
SCARB1-211ENST00000546215 ADPGKQ9BRR6 497 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 TRIM6Q9C030 488 aaPredicted RBP22.8■■□□□ 1.24
SCARB1-211ENST00000546215 RNF19AQ9NV58 838 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 EXOC1Q9NV70 894 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 INSL6Q9Y581 213 aa22.8■■□□□ 1.24
SCARB1-211ENST00000546215 SZT2Q5T011 3432 aa22.79■■□□□ 1.24
SCARB1-211ENST00000546215 CHD7Q9P2D1 2997 aa22.79■■□□□ 1.24
SCARB1-211ENST00000546215 MEIS3P2A8K0S8 358 aa22.79■■□□□ 1.24
SCARB1-211ENST00000546215 SOX1O00570 391 aaPredicted RBP22.79■■□□□ 1.24
SCARB1-211ENST00000546215 TOM1L1O75674 476 aa22.79■■□□□ 1.24
SCARB1-211ENST00000546215 MYOGP15173 224 aa22.79■■□□□ 1.24
SCARB1-211ENST00000546215 PSMD2Q13200 908 aa22.79■■□□□ 1.24
SCARB1-211ENST00000546215 RNF169Q8NCN4 708 aa22.79■■□□□ 1.24
SCARB1-211ENST00000546215 LPPQ93052 612 aa22.79■■□□□ 1.24
SCARB1-211ENST00000546215 ZBTB45Q96K62 511 aaPredicted RBP22.79■■□□□ 1.24
SCARB1-211ENST00000546215 SLC39A2Q9NP94 309 aa22.79■■□□□ 1.24
SCARB1-211ENST00000546215 HOOK1Q9UJC3 728 aaKnown RBP22.79■■□□□ 1.24
SCARB1-211ENST00000546215 YBX2Q9Y2T7 364 aaKnown RBP22.79■■□□□ 1.24
SCARB1-211ENST00000546215 HES2Q9Y543 173 aa22.79■■□□□ 1.24
SCARB1-211ENST00000546215 COL4A6Q14031 1691 aa22.78■■□□□ 1.24
SCARB1-211ENST00000546215 HNRNPDLO14979 420 aaKnown RBP22.78■■□□□ 1.24
SCARB1-211ENST00000546215 PRPF6O94906 941 aaKnown RBP22.78■■□□□ 1.24
SCARB1-211ENST00000546215 RHOBTB3O94955 611 aa22.78■■□□□ 1.24
SCARB1-211ENST00000546215 FGFR1P11362 822 aa22.78■■□□□ 1.24
SCARB1-211ENST00000546215 STK4Q13043 487 aa22.78■■□□□ 1.24
SCARB1-211ENST00000546215 KCNB1Q14721 858 aa22.78■■□□□ 1.24
SCARB1-211ENST00000546215 SLC39A4Q6P5W5 647 aa22.78■■□□□ 1.24
SCARB1-211ENST00000546215 SPATA20Q8TB22 786 aa22.78■■□□□ 1.24
SCARB1-211ENST00000546215 ERCC4Q92889 916 aaPredicted RBP22.78■■□□□ 1.24
SCARB1-211ENST00000546215 PGBD4Q96DM1 585 aa22.78■■□□□ 1.24
SCARB1-211ENST00000546215 BICD1Q96G01 975 aa22.78■■□□□ 1.24
SCARB1-211ENST00000546215 ACCSQ96QU6 501 aa22.78■■□□□ 1.24
SCARB1-211ENST00000546215 YME1L1Q96TA2 773 aa22.78■■□□□ 1.24
SCARB1-211ENST00000546215 NXF3Q9H4D5 531 aaKnown RBP22.78■■□□□ 1.24
SCARB1-211ENST00000546215 LCHNA4D1U4 455 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 EIF3DO15371 548 aaKnown RBP eCLIP22.77■■□□□ 1.241e-7■□□□□ 8.6
SCARB1-211ENST00000546215 LIG4P49917 911 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 GATMP50440 423 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 RAB30Q15771 203 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 DCAF4L1Q3SXM0 396 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 MPZL3Q6UWV2 235 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 AGMOQ6ZNB7 445 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 STXBP4Q6ZWJ1 553 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 KIAA0895Q8NCT3 520 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 ZNF507Q8TCN5 953 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 HAPLN2Q9GZV7 340 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 CDT1Q9H211 546 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 RNF39Q9H2S5 420 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms