RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 NEDD9Q14511 834 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 MTFR1Q15390 333 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 CRY2Q49AN0 593 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 EAPPQ56P03 285 aaPredicted RBP7□□□□□ -1.29
SNHG1-225ENST00000545920 C6orf118Q5T5N4 469 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 C11orf63Q6NUN7 778 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 DPY19L2P1Q6NXN4 242 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 CRELD2Q6UXH1 353 aaPredicted RBP7□□□□□ -1.29
SNHG1-225ENST00000545920 SYDE1Q6ZW31 735 aaPredicted RBP7□□□□□ -1.29
SNHG1-225ENST00000545920 TMC3Q7Z5M5 1100 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 NT5DC3Q86UY8 548 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 COL23A1Q86Y22 540 aaPredicted RBP7□□□□□ -1.29
SNHG1-225ENST00000545920 SLC9A9Q8IVB4 645 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 MAPKAPK5Q8IW41 473 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 UBL4BQ8N7F7 174 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 FAM133AQ8N9E0 248 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 SLC17A8Q8NDX2 589 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 MAIP1Q8WWC4 291 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 CTNNBL1Q8WYA6 563 aaPredicted RBP7□□□□□ -1.29
SNHG1-225ENST00000545920 TLCD1Q96CP7 247 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 RBM17Q96I25 401 aaKnown RBP7□□□□□ -1.29
SNHG1-225ENST00000545920 GDAP1L1Q96MZ0 367 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 C8orf37Q96NL8 207 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 ANKRD27Q96NW4 1050 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 RPS6KC1Q96S38 1066 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 PSMD1Q99460 953 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 PLVAPQ9BX97 442 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 TXLNGYQ9BZA5 131 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 TSPAN10Q9H1Z9 355 aaPredicted RBP7□□□□□ -1.29
SNHG1-225ENST00000545920 ETNK1Q9HBU6 452 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 TUFT1Q9NNX1 390 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7□□□□□ -1.29
SNHG1-225ENST00000545920 TMPRSS4Q9NRS4 437 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 KLC4Q9NSK0 619 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 SCHIP1Q9P0W5 487 aaPredicted RBP7□□□□□ -1.29
SNHG1-225ENST00000545920 NYAP2Q9P242 653 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 MTRF1LQ9UGC7 380 aaKnown RBP7□□□□□ -1.29
SNHG1-225ENST00000545920 USP20Q9Y2K6 914 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 RABGAP1Q9Y3P9 1069 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 NHSQ6T4R5 1651 aa7□□□□□ -1.29
SNHG1-225ENST00000545920 MYH14Q7Z406 1995 aaKnown RBP6.99□□□□□ -1.29
SNHG1-225ENST00000545920 A0A1W2PRU2 124 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 ANKRD62A6NC57 917 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 E7EVH7 732 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 F8VZ95 297 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 NDC80O14777 642 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 TREHO43280 583 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 EDIL3O43854 480 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 TBCAO75347 108 aaKnown RBP6.99□□□□□ -1.29
SNHG1-225ENST00000545920 MTA2O94776 668 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 IGHA2P01877 340 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 NR3C1P04150 777 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 FAM153BP0C7A2 387 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 GOLGA8HP0CJ92 632 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 MAPTP10636 758 aaKnown RBP6.99□□□□□ -1.29
SNHG1-225ENST00000545920 HOXA10P31260 410 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-225ENST00000545920 SOX5P35711 763 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 MAP2K2P36507 400 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 SREBF1P36956 1147 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 POU5F1Q01860 360 aaKnown RBP6.99□□□□□ -1.29
SNHG1-225ENST00000545920 CETN1Q12798 172 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 GIT2Q14161 759 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 FAM153CQ494X1 144 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 PREPLQ4J6C6 727 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-225ENST00000545920 ODF2Q5BJF6 829 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 ERMARDQ5T6L9 678 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 WLSQ5T9L3 541 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 DUPD1Q68J44 220 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 C16orf46Q6P387 395 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 HHIPL2Q6UWX4 724 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 CYFIP1Q7L576 1253 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 TAOK1Q7L7X3 1001 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 HS2ST1Q7LGA3 356 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 ZNF571Q7Z3V5 609 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-225ENST00000545920 TMC7Q7Z402 723 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 ADGRF4Q8IZF3 695 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 METTL13Q8N6R0 699 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 ANKRD13CQ8N6S4 541 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 SLC30A5Q8TAD4 765 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 ETNPPLQ8TBG4 499 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 NEK9Q8TD19 979 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 CRYGNQ8WXF5 182 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 CHMP6Q96FZ7 201 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 SGSM3Q96HU1 749 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 MS4A14Q96JA4 679 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 FAM81BQ96LP2 452 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 CCDC114Q96M63 670 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 CRAMP1Q96RY5 1269 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 FMO2Q99518 471 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 ERP44Q9BS26 406 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 C2orf49Q9BVC5 232 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-225ENST00000545920 ANO3Q9BYT9 981 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 COA1Q9GZY4 146 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 SAP130Q9H0E3 1048 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 PABPC3Q9H361 631 aaKnown RBP6.99□□□□□ -1.29
SNHG1-225ENST00000545920 EHMT1Q9H9B1 1298 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 PCYOX1Q9UHG3 505 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 FAM153AQ9UHL3 310 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 SERPINB13Q9UIV8 391 aa6.99□□□□□ -1.29
SNHG1-225ENST00000545920 ODF2LQ9ULJ1 636 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms