RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 U2AF2P26368 475 aaKnown RBP eCLIP23.43■■□□□ 1.34
SCARB1-210ENST00000545493 TOB1P50616 345 aaPredicted RBP23.43■■□□□ 1.34
SCARB1-210ENST00000545493 FXR2P51116 673 aaKnown RBP eCLIP23.43■■□□□ 1.34
SCARB1-210ENST00000545493 PTPN14Q15678 1187 aa23.43■■□□□ 1.34
SCARB1-210ENST00000545493 ECM1Q16610 540 aa23.43■■□□□ 1.34
SCARB1-210ENST00000545493 HERC4Q5GLZ8 1057 aaPredicted RBP23.43■■□□□ 1.34
SCARB1-210ENST00000545493 CDR2LQ86X02 465 aaPredicted RBP23.43■■□□□ 1.34
SCARB1-210ENST00000545493 MCPH1Q8NEM0 835 aa23.43■■□□□ 1.34
SCARB1-210ENST00000545493 BSNDQ8WZ55 320 aa23.43■■□□□ 1.34
SCARB1-210ENST00000545493 NACC1Q96RE7 527 aa23.43■■□□□ 1.34
SCARB1-210ENST00000545493 NOL7Q9UMY1 257 aaKnown RBP23.43■■□□□ 1.34
SCARB1-210ENST00000545493 WDFY4Q6ZS81 3184 aa23.42■■□□□ 1.34
SCARB1-210ENST00000545493 LRRIQ4A6NIV6 560 aa23.42■■□□□ 1.34
SCARB1-210ENST00000545493 CD2BP2O95400 341 aaKnown RBP23.42■■□□□ 1.34
SCARB1-210ENST00000545493 HAUS3Q68CZ6 603 aa23.42■■□□□ 1.34
SCARB1-210ENST00000545493 PPP4R3CPQ6ZMV5 832 aa23.42■■□□□ 1.34
SCARB1-210ENST00000545493 ZFP42Q96MM3 310 aa23.42■■□□□ 1.34
SCARB1-210ENST00000545493 GAD1Q99259 594 aa23.42■■□□□ 1.34
SCARB1-210ENST00000545493 UBN1Q9NPG3 1134 aa23.42■■□□□ 1.34
SCARB1-210ENST00000545493 DENND4AQ7Z401 1863 aa23.41■■□□□ 1.34
SCARB1-210ENST00000545493 ARL5CA6NH57 179 aa23.41■■□□□ 1.34
SCARB1-210ENST00000545493 CXCL14O95715 111 aa23.41■■□□□ 1.34
SCARB1-210ENST00000545493 HOXB8P17481 243 aaPredicted RBP23.41■■□□□ 1.34
SCARB1-210ENST00000545493 SCNN1GP51170 649 aa23.41■■□□□ 1.34
SCARB1-210ENST00000545493 PADI6Q6TGC4 694 aa23.41■■□□□ 1.34
SCARB1-210ENST00000545493 APOL6Q9BWW8 343 aa23.41■■□□□ 1.34
SCARB1-210ENST00000545493 KANSL3Q9P2N6 904 aa23.41■■□□□ 1.34
SCARB1-210ENST00000545493 HCN4Q9Y3Q4 1203 aa23.41■■□□□ 1.34
SCARB1-210ENST00000545493 PCDHB6Q9Y5E3 794 aa23.41■■□□□ 1.34
SCARB1-210ENST00000545493 NRP1O14786 923 aa23.4■■□□□ 1.34
SCARB1-210ENST00000545493 NPTXRO95502 500 aa23.4■■□□□ 1.34
SCARB1-210ENST00000545493 EDN1P05305 212 aa23.4■■□□□ 1.34
SCARB1-210ENST00000545493 DSC1Q08554 894 aa23.4■■□□□ 1.34
SCARB1-210ENST00000545493 SLC27A1Q6PCB7 646 aa23.4■■□□□ 1.34
SCARB1-210ENST00000545493 COLGALT2Q8IYK4 626 aa23.4■■□□□ 1.34
SCARB1-210ENST00000545493 RPGRIP1Q96KN7 1286 aa23.4■■□□□ 1.34
SCARB1-210ENST00000545493 FAM193BQ96PV7 902 aaPredicted RBP23.4■■□□□ 1.34
SCARB1-210ENST00000545493 TRIM6Q9C030 488 aaPredicted RBP23.4■■□□□ 1.34
SCARB1-210ENST00000545493 MIOSQ9NXC5 875 aa23.4■■□□□ 1.34
SCARB1-210ENST00000545493 PRG3Q9Y2Y8 225 aaPredicted RBP23.4■■□□□ 1.34
SCARB1-210ENST00000545493 TECTAO75443 2155 aa23.4■■□□□ 1.34
SCARB1-210ENST00000545493 ARHGEF35A5YM69 484 aa23.39■■□□□ 1.33
SCARB1-210ENST00000545493 TTLL13PA6NNM8 815 aa23.39■■□□□ 1.33
SCARB1-210ENST00000545493 EPCAMP16422 314 aa23.39■■□□□ 1.33
SCARB1-210ENST00000545493 MUTP22033 750 aa23.39■■□□□ 1.33
SCARB1-210ENST00000545493 NCBP1Q09161 790 aaKnown RBP23.39■■□□□ 1.33
SCARB1-210ENST00000545493 PRIMPOLQ96LW4 560 aa23.39■■□□□ 1.33
SCARB1-210ENST00000545493 FZD8Q9H461 694 aa23.39■■□□□ 1.33
SCARB1-210ENST00000545493 PRMT7Q9NVM4 692 aaPredicted RBP23.39■■□□□ 1.33
SCARB1-210ENST00000545493 GIT1Q9Y2X7 761 aa23.39■■□□□ 1.33
SCARB1-210ENST00000545493 ZMYM2Q9UBW7 1377 aa23.39■■□□□ 1.33
SCARB1-210ENST00000545493 A0A1B0GUA9 196 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 F8W810 466 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 ST18O60284 1047 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 CYP11B2P19099 503 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 AKAP5P24588 427 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 CCT6AP40227 531 aaKnown RBP23.38■■□□□ 1.33
SCARB1-210ENST00000545493 GIT2Q14161 759 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 BMS1Q14692 1282 aaKnown RBP23.38■■□□□ 1.33
SCARB1-210ENST00000545493 FAM187BQ17R55 369 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 ZBTB8OSQ8IWT0 167 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 RNF168Q8IYW5 571 aaPredicted RBP23.38■■□□□ 1.33
SCARB1-210ENST00000545493 IGSF22Q8N9C0 903 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 GSTCDQ8NEC7 633 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 FEZF2Q8TBJ5 459 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 SLC22A17Q8WUG5 538 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 TMX3Q96JJ7 454 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 HERC2P3Q9BVR0 1158 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 CCDC113Q9H0I3 377 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 LRWD1Q9UFC0 647 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 FAN1Q9Y2M0 1017 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 PLXNA3P51805 1871 aa23.38■■□□□ 1.33
SCARB1-210ENST00000545493 EFEMP2O95967 443 aa23.37■■□□□ 1.33
SCARB1-210ENST00000545493 SSBP05455 408 aaKnown RBP eCLIP23.37■■□□□ 1.33
SCARB1-210ENST00000545493 PLA2G5P39877 138 aa23.37■■□□□ 1.33
SCARB1-210ENST00000545493 PTGDRQ13258 359 aa23.37■■□□□ 1.33
SCARB1-210ENST00000545493 TPRNQ4KMQ1 711 aa23.37■■□□□ 1.33
SCARB1-210ENST00000545493 SNX29Q8TEQ0 813 aa23.37■■□□□ 1.33
SCARB1-210ENST00000545493 KIFC3Q9BVG8 833 aa23.37■■□□□ 1.33
SCARB1-210ENST00000545493 BHMT2Q9H2M3 363 aa23.37■■□□□ 1.33
SCARB1-210ENST00000545493 POMKQ9H5K3 350 aa23.37■■□□□ 1.33
SCARB1-210ENST00000545493 PDZD7Q9H5P4 517 aa23.37■■□□□ 1.33
SCARB1-210ENST00000545493 DZANK1Q9NVP4 752 aa23.37■■□□□ 1.33
SCARB1-210ENST00000545493 PP2D1A8MPX8 630 aa23.36■■□□□ 1.33
SCARB1-210ENST00000545493 LILRB3O75022 631 aa23.36■■□□□ 1.33
SCARB1-210ENST00000545493 SOD2P04179 222 aa23.36■■□□□ 1.33
SCARB1-210ENST00000545493 ALDH2P05091 517 aa23.36■■□□□ 1.33
SCARB1-210ENST00000545493 SP100P23497 879 aaPredicted RBP23.36■■□□□ 1.33
SCARB1-210ENST00000545493 NAMPTP43490 491 aa23.36■■□□□ 1.33
SCARB1-210ENST00000545493 OR1G1P47890 313 aa23.36■■□□□ 1.33
SCARB1-210ENST00000545493 IL17AQ16552 155 aa23.36■■□□□ 1.33
SCARB1-210ENST00000545493 RARS2Q5T160 578 aaKnown RBP23.36■■□□□ 1.33
SCARB1-210ENST00000545493 HACE1Q8IYU2 909 aa23.36■■□□□ 1.33
SCARB1-210ENST00000545493 C12orf76Q8N812 135 aaPredicted RBP23.36■■□□□ 1.33
SCARB1-210ENST00000545493 C2orf40Q9H1Z8 148 aa23.36■■□□□ 1.33
SCARB1-210ENST00000545493 ADAM7Q9H2U9 754 aa23.36■■□□□ 1.33
SCARB1-210ENST00000545493 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.36■■□□□ 1.33
SCARB1-210ENST00000545493 DDX19AQ9NUU7 478 aaKnown RBP23.36■■□□□ 1.33
SCARB1-210ENST00000545493 STK39Q9UEW8 545 aa23.36■■□□□ 1.33
SCARB1-210ENST00000545493 KIAA1024Q9UPX6 916 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms