RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ATF7P17544 494 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 IBSPP21815 317 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 HTRA4P83105 476 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 DPYDQ12882 1025 aa18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 ALCAMQ13740 583 aa18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 RAB30Q15771 203 aa18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 ZC2HC1CQ53FD0 456 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 ATF7IP2Q5U623 682 aa18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 ZNF598Q86UK7 904 aaKnown RBP18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 CDR2LQ86X02 465 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 HVCN1Q96D96 273 aa18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 TARS2Q9BW92 718 aaKnown RBP18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 EIF2AQ9BY44 585 aaKnown RBP18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 PBX4Q9BYU1 374 aa18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 TLL1O43897 1013 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 KINO60870 393 aaKnown RBP18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 DGKIO75912 1065 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 GCNT3O95395 438 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 POSTNQ15063 836 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 FAM26FQ5R3K3 315 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 EEF1DP3Q658K8 133 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 ZPBP2Q6X784 338 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 MRPL10Q7Z7H8 261 aaKnown RBP18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 MAP4K3Q8IVH8 894 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 ELOA2Q8IYF1 753 aaPredicted RBP18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 ADPGKQ9BRR6 497 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 LMBRD1Q9NUN5 540 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 MSRAQ9UJ68 235 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 INSL6Q9Y581 213 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 PCDHB13Q9Y5F0 798 aa18.78■□□□□ 0.6
RABGGTA-203ENST00000543002 GOLGA6L22H0YM25 854 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 SOX1O00570 391 aaPredicted RBP18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 NPTXRO95502 500 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 PIGRP01833 764 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 MYBP10242 640 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 PBX2P40425 430 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 CASP5P51878 434 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 KMT5BQ4FZB7 885 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 RNF169Q8NCN4 708 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 SMG8Q8ND04 991 aaKnown RBP18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 HPS3Q969F9 1004 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 ZNF689Q96CS4 500 aaPredicted RBP18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 PGBD4Q96DM1 585 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 YME1L1Q96TA2 773 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 FGFBP2Q9BYJ0 223 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 TRIM6Q9C030 488 aaPredicted RBP18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 RC3H2Q9HBD1 1191 aaKnown RBP18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 PTPRHQ9HD43 1115 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 YBX2Q9Y2T7 364 aaKnown RBP18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 IPPQ9Y573 584 aa18.77■□□□□ 0.6
RABGGTA-203ENST00000543002 HOXA2O43364 376 aa18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 TOM1L1O75674 476 aa18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 RPN1P04843 607 aaKnown RBP18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 PROZP22891 400 aa18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 DNAJB2P25686 324 aa18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 DCAF4L1Q3SXM0 396 aa18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 L1TD1Q5T7N2 865 aaKnown RBP18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 STXBP4Q6ZWJ1 553 aa18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 APBB1IPQ7Z5R6 666 aaPredicted RBP18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 BICD1Q96G01 975 aa18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 RNF19AQ9NV58 838 aa18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 EXOC1Q9NV70 894 aa18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 HOOK1Q9UJC3 728 aaKnown RBP18.76■□□□□ 0.59
RABGGTA-203ENST00000543002 LAMA2P24043 3122 aaKnown RBP18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 ABLIM1O14639 778 aa18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 HNRNPDLO14979 420 aaKnown RBP18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 FGFR1P11362 822 aa18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 MYOGP15173 224 aa18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 PSMD2Q13200 908 aa18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 PNOCQ13519 176 aa18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 MPZL3Q6UWV2 235 aa18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 EPM2AIP1Q7L775 607 aaPredicted RBP18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 HACE1Q8IYU2 909 aa18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 GLIS3Q8NEA6 775 aa18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 SP7Q8TDD2 431 aaPredicted RBP18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 LPPQ93052 612 aa18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 CCDC47Q96A33 483 aaKnown RBP18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 ACCSQ96QU6 501 aa18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 EXOC7Q9UPT5 735 aa18.75■□□□□ 0.59
RABGGTA-203ENST00000543002 LCHNA4D1U4 455 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 MEIS3P2A8K0S8 358 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 EIF3DO15371 548 aaKnown RBP eCLIP18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 RHOBTB3O94955 611 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 MCF2P10911 925 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 ITGA4P13612 1032 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 LIG4P49917 911 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 GATMP50440 423 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 KCNA1Q09470 495 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 KCNB1Q14721 858 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 ZNF568Q3ZCX4 644 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 AGMOQ6ZNB7 445 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 CMTR2Q8IYT2 770 aaKnown RBP18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 ZBTB45Q96K62 511 aaPredicted RBP18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 TCHPQ9BT92 498 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 TMEM117Q9H0C3 514 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 CDT1Q9H211 546 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 NKX2-4Q9H2Z4 354 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 NXF3Q9H4D5 531 aaKnown RBP18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 HES2Q9Y543 173 aa18.74■□□□□ 0.59
RABGGTA-203ENST00000543002 GBF1Q92538 1859 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms