RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PTPN21Q16825 1174 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 ZXDCQ2QGD7 858 aaPredicted RBP4.28□□□□□ -1.72
USP28-210ENST00000542033 ANO4Q32M45 955 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 INAVAQ3KP66 663 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 MUM1L1Q5H9M0 696 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 BTNL9Q6UXG8 535 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 TAS1R1Q7RTX1 841 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 ADGRE4PQ86SQ3 457 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 GLB1L3Q8NCI6 653 aaPredicted RBP4.28□□□□□ -1.72
USP28-210ENST00000542033 TSPEARQ8WU66 669 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 UBE2Q2Q8WVN8 375 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 SSH1Q8WYL5 1049 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 EDAQ92838 391 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 ARL8AQ96BM9 186 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 MPHOSPH9Q99550 1183 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 IL23AQ9NPF7 189 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 ING3Q9NXR8 418 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 PLA2G3Q9NZ20 509 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 KLHL42Q9P2K6 505 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 TESMINQ9Y4I5 508 aa4.28□□□□□ -1.72
USP28-210ENST00000542033 RPTORQ8N122 1335 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 UBE2QL1A1L167 161 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 CYP27B1O15528 508 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 PHF2O75151 1096 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 PDGFRBP09619 1106 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 CTSSP25774 331 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 WNT3AP56704 352 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 DUSP2Q05923 314 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 MALLQ13021 153 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 DUSP8Q13202 625 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 UBE3CQ15386 1083 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 PLEKHG6Q3KR16 790 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 GJC2Q5T442 439 aaPredicted RBP4.27□□□□□ -1.73
USP28-210ENST00000542033 ZBTB46Q86UZ6 589 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 PALM2Q8IXS6 379 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 GPR135Q8IZ08 494 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 CMTM4Q8IZR5 234 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 PPM1NQ8N819 430 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.27□□□□□ -1.73
USP28-210ENST00000542033 OR5M3Q8NGP4 307 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 TMEM176AQ96HP8 235 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 SLC2A13Q96QE2 648 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 ADOQ96SZ5 270 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 GPHA2Q96T91 129 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 TCF25Q9BQ70 676 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 ADI1Q9BV57 179 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 EPC1Q9H2F5 836 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 GREM2Q9H772 168 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 TLR9Q9NR96 1032 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 JAG2Q9Y219 1238 aa4.27□□□□□ -1.73
USP28-210ENST00000542033 TNKSO95271 1327 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 AKR1B10O60218 316 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 TMEM127O75204 238 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 SNUPNO95149 360 aaKnown RBP4.26□□□□□ -1.73
USP28-210ENST00000542033 S100BP04271 92 aaPredicted RBP4.26□□□□□ -1.73
USP28-210ENST00000542033 INSRRP14616 1297 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 GYPEP15421 78 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 ACO1P21399 889 aaKnown RBP4.26□□□□□ -1.73
USP28-210ENST00000542033 MSX2P35548 267 aaPredicted RBP4.26□□□□□ -1.73
USP28-210ENST00000542033 KRT85P78386 507 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 SAFB2Q14151 953 aaKnown RBP eCLIP4.26□□□□□ -1.73
USP28-210ENST00000542033 PCBP2Q15366 365 aaKnown RBP eCLIP4.26□□□□□ -1.73
USP28-210ENST00000542033 C19orf54Q5BKX5 351 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 EFCAB2Q5VUJ9 269 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 ANKRD35Q8N283 1001 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 D2HGDHQ8N465 521 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 MSL3Q8N5Y2 521 aaKnown RBP4.26□□□□□ -1.73
USP28-210ENST00000542033 GPR156Q8NFN8 814 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 ZNF480Q8WV37 535 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 SNX33Q8WV41 574 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 RIN2Q8WYP3 895 aaPredicted RBP4.26□□□□□ -1.73
USP28-210ENST00000542033 WWC2-AS2Q96NR7 200 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 CHMP4AQ9BY43 222 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 SLC13A1Q9BZW2 595 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 ZNF277Q9NRM2 450 aaPredicted RBP4.26□□□□□ -1.73
USP28-210ENST00000542033 RBM12Q9NTZ6 932 aaKnown RBP4.26□□□□□ -1.73
USP28-210ENST00000542033 SAP30BPQ9UHR5 308 aaKnown RBP4.26□□□□□ -1.73
USP28-210ENST00000542033 DNM3Q9UQ16 869 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 PCDHGA2Q9Y5H1 932 aa4.26□□□□□ -1.73
USP28-210ENST00000542033 ALDH1L1O75891 902 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 GSPT1P15170 499 aaKnown RBP4.25□□□□□ -1.73
USP28-210ENST00000542033 ECHS1P30084 290 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 ADSLP30566 484 aaPredicted RBP4.25□□□□□ -1.73
USP28-210ENST00000542033 CASRP41180 1078 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 NEK2P51955 445 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 SLC16A1P53985 500 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 PER3P56645 1201 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 ADAM8P78325 824 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 FOXL1Q12952 345 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 PUM1Q14671 1186 aaKnown RBP eCLIP4.25□□□□□ -1.73
USP28-210ENST00000542033 NOMO1Q15155 1222 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 HSP90AB2PQ58FF8 381 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 MFSD5Q6N075 450 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 FAM111BQ6SJ93 734 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 MAMDC4Q6UXC1 1216 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 ABHD15Q6UXT9 468 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 SGMS1Q86VZ5 419 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 STAG1Q8WVM7 1258 aa4.25□□□□□ -1.73
USP28-210ENST00000542033 JADE3Q92613 823 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms