RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SERPINB13Q9UIV8 391 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 TMEM59LQ9UK28 342 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 CDV3Q9UKY7 258 aaKnown RBP8.33□□□□□ -1.08
CCDC60-204ENST00000539847 SIK3Q9Y2K2 1263 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 SLC4A4Q9Y6R1 1079 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 ATAD5Q96QE3 1844 aa8.33□□□□□ -1.08
CCDC60-204ENST00000539847 GOLGA6L10A6NI86 522 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 ZNF233A6NK53 670 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 ZNF263O14978 683 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 ZNF185O15231 689 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 SLC26A4O43511 780 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 CNMDO75829 334 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 DNAJC8O75937 253 aaPredicted RBP8.32□□□□□ -1.08
CCDC60-204ENST00000539847 GDF11O95390 407 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 GH2P01242 217 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 GSTA1P08263 222 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 CYBAP13498 195 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 SCG2P13521 617 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 VCAM1P19320 739 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 VARSP26640 1264 aaKnown RBP8.32□□□□□ -1.08
CCDC60-204ENST00000539847 ELF1P32519 619 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 KIF5BP33176 963 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 UBA7P41226 1012 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 RTP1P59025 263 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 NLRP5P59047 1200 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 C2orf54Q08AI8 447 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 MRPL58Q14197 206 aaKnown RBP8.32□□□□□ -1.08
CCDC60-204ENST00000539847 NAB2Q15742 525 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 PPP2R5EQ16537 467 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 IL17AQ16552 155 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 IFI16Q16666 785 aaKnown RBP8.32□□□□□ -1.08
CCDC60-204ENST00000539847 CCDC96Q2M329 555 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 VWA3BQ502W6 1294 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 EARS2Q5JPH6 523 aaKnown RBP8.32□□□□□ -1.08
CCDC60-204ENST00000539847 MIIPQ5JXC2 388 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 IFIT1BQ5T764 474 aaKnown RBP8.32□□□□□ -1.08
CCDC60-204ENST00000539847 VASH1Q7L8A9 365 aaPredicted RBP8.32□□□□□ -1.08
CCDC60-204ENST00000539847 MAPKAPK5Q8IW41 473 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 MAGEB6Q8N7X4 407 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.32□□□□□ -1.08
CCDC60-204ENST00000539847 CCHCR1Q8TD31 782 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 HELQQ8TDG4 1101 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 NUP133Q8WUM0 1156 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 PIK3R5Q8WYR1 880 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 SGSM3Q96HU1 749 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 RNPC3Q96LT9 517 aaKnown RBP8.32□□□□□ -1.08
CCDC60-204ENST00000539847 NOC4LQ9BVI4 516 aaKnown RBP8.32□□□□□ -1.08
CCDC60-204ENST00000539847 RBCK1Q9BYM8 510 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 SENP6Q9GZR1 1112 aaPredicted RBP8.32□□□□□ -1.08
CCDC60-204ENST00000539847 BLZF1Q9H2G9 400 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 CNOT10Q9H9A5 744 aaKnown RBP8.32□□□□□ -1.08
CCDC60-204ENST00000539847 RIC8AQ9NPQ8 531 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 AGPAT5Q9NUQ2 364 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 HOXC10Q9NYD6 342 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 VPS54Q9P1Q0 977 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 LRWD1Q9UFC0 647 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 SWAP70Q9UH65 585 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 SUFUQ9UMX1 484 aa8.32□□□□□ -1.08
CCDC60-204ENST00000539847 VCANP13611 3396 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 TNKSO95271 1327 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 MAST2Q6P0Q8 1798 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 B4DLN1 442 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 KBTBD13C9JR72 458 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 ANKRD65E5RJM6 399 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 GCOM1H8Y6P7 765 aaPredicted RBP8.31□□□□□ -1.08
CCDC60-204ENST00000539847 SCAMP3O14828 347 aaKnown RBP8.31□□□□□ -1.08
CCDC60-204ENST00000539847 SEPT4O43236 478 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 TRAPPC3O43617 180 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 STAU1O95793 577 aaKnown RBP8.31□□□□□ -1.08
CCDC60-204ENST00000539847 P4HBP07237 508 aaKnown RBP8.31□□□□□ -1.08
CCDC60-204ENST00000539847 MYZAPP0CAP1 466 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 EZRP15311 586 aaKnown RBP8.31□□□□□ -1.08
CCDC60-204ENST00000539847 GCFC2P16383 781 aaKnown RBP8.31□□□□□ -1.08
CCDC60-204ENST00000539847 CASP1P29466 404 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 EIF4A3P38919 411 aaKnown RBP8.31□□□□□ -1.08
CCDC60-204ENST00000539847 MTIF2P46199 727 aaKnown RBP8.31□□□□□ -1.08
CCDC60-204ENST00000539847 KIF11P52732 1056 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 EIF3BP55884 814 aaKnown RBP8.31□□□□□ -1.08
CCDC60-204ENST00000539847 LRRC63Q05C16 580 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 PDCLQ13371 301 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 SEPT2Q15019 361 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 SNCBQ16143 134 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 MAN2A1Q16706 1144 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 CERKLQ49MI3 558 aaPredicted RBP8.31□□□□□ -1.08
CCDC60-204ENST00000539847 KLHDC7AQ5VTJ3 777 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 POTEGQ6S5H5 508 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 ADGRA1Q86SQ6 560 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 FMNL3Q8IVF7 1028 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 BLIDQ8IZY5 108 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 GUF1Q8N442 669 aaKnown RBP8.31□□□□□ -1.08
CCDC60-204ENST00000539847 ENAHQ8N8S7 591 aaPredicted RBP8.31□□□□□ -1.08
CCDC60-204ENST00000539847 MAB21L3Q8N8X9 362 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 GPATCH11Q8N954 259 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 HDAC7Q8WUI4 952 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 MIEF2Q96C03 454 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 ANKRD27Q96NW4 1050 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 LZTS2Q9BRK4 669 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 PLEKHA4Q9H4M7 779 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 MROH8Q9H579 483 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 ARMT1Q9H993 441 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms