RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CAPSQ13938 189 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 MXD4Q14582 209 aaPredicted RBP13.93□□□□□ -0.18
VAMP1-206ENST00000538970 KANK3Q6NY19 840 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 NOTUMQ6P988 496 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 ERMP1Q7Z2K6 904 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 DIS3L2Q8IYB7 885 aaKnown RBP13.93□□□□□ -0.18
VAMP1-206ENST00000538970 ASAP3Q8TDY4 903 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 CCDC51Q96ER9 411 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 EIF2AQ9BY44 585 aaKnown RBP13.93□□□□□ -0.18
VAMP1-206ENST00000538970 TTC12Q9H892 705 aaPredicted RBP13.93□□□□□ -0.18
VAMP1-206ENST00000538970 UBN1Q9NPG3 1134 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 ANKEF1Q9NU02 776 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 MARCH5Q9NX47 278 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 PCDHA12Q9UN75 941 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 IPPQ9Y573 584 aa13.93□□□□□ -0.18
VAMP1-206ENST00000538970 INO80B-WBP1J3KQ70 363 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 NRP1O14786 923 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 NEMFO60524 1076 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 SSBP05455 408 aaKnown RBP eCLIP13.92□□□□□ -0.18
VAMP1-206ENST00000538970 ITGA4P13612 1032 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 MLH1P40692 756 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 RARRES1P49788 294 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 MBTD1Q05BQ5 628 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 POU5F1BQ06416 359 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 ST3GAL1Q11201 340 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 MTMR3Q13615 1198 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 TFDP1Q14186 410 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 AMHR2Q16671 573 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 CABP7Q86V35 215 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 PPFIBP1Q86W92 1011 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 TDRD5Q8NAT2 981 aaKnown RBP13.92□□□□□ -0.18
VAMP1-206ENST00000538970 KREMEN2Q8NCW0 462 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 FEZF2Q8TBJ5 459 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 CPB2Q96IY4 423 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 KLHL5Q96PQ7 755 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 FAM193BQ96PV7 902 aaPredicted RBP13.92□□□□□ -0.18
VAMP1-206ENST00000538970 MTMR9Q96QG7 549 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 EMILIN2Q9BXX0 1053 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 SFXN1Q9H9B4 322 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 SORCS3Q9UPU3 1222 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 FAN1Q9Y2M0 1017 aa13.92□□□□□ -0.18
VAMP1-206ENST00000538970 DENND4AQ7Z401 1863 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 ARL5CA6NH57 179 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 LILRB3O75022 631 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 BRD1O95696 1058 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 SOD2P04179 222 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 ALDH2P05091 517 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 CNPP09543 421 aaKnown RBP13.91□□□□□ -0.18
VAMP1-206ENST00000538970 GLRA2P23416 452 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 ARL2P36404 184 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 TXKP42681 527 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 ID4P47928 161 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 CLCN4P51793 760 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 FOSBP53539 338 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 DSC1Q08554 894 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 ATAT1Q5SQI0 421 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 COLGALT2Q8IYK4 626 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 UBALD2Q8IYN6 164 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 RNF168Q8IYW5 571 aaPredicted RBP13.91□□□□□ -0.18
VAMP1-206ENST00000538970 ZDHHC14Q8IZN3 488 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 CCDC43Q96MW1 224 aaKnown RBP13.91□□□□□ -0.18
VAMP1-206ENST00000538970 GAD1Q99259 594 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 HERC2P3Q9BVR0 1158 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 NFKBIZQ9BYH8 718 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 CSRNP2Q9H175 543 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 DBR1Q9UK59 544 aaKnown RBP13.91□□□□□ -0.18
VAMP1-206ENST00000538970 USTQ9Y2C2 406 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 PRG3Q9Y2Y8 225 aaPredicted RBP13.91□□□□□ -0.18
VAMP1-206ENST00000538970 HES2Q9Y543 173 aa13.91□□□□□ -0.18
VAMP1-206ENST00000538970 POTEMA6NI47 508 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 B4GALT5O43286 388 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 EFEMP2O95967 443 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 ARF4P18085 180 aaPredicted RBP13.9□□□□□ -0.18
VAMP1-206ENST00000538970 KLRC2P26717 231 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 SCNN1GP51170 649 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 NEK4P51957 841 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 NCBP1Q09161 790 aaKnown RBP13.9□□□□□ -0.18
VAMP1-206ENST00000538970 TRIM29Q14134 588 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 TMC5Q6UXY8 1006 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 GPR149Q86SP6 731 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 PIGOQ8TEQ8 1089 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 ZFP42Q96MM3 310 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 POLR3FQ9H1D9 316 aaPredicted RBP13.9□□□□□ -0.18
VAMP1-206ENST00000538970 TMEM60Q9H2L4 133 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 NXF3Q9H4D5 531 aaKnown RBP13.9□□□□□ -0.18
VAMP1-206ENST00000538970 MRPL17Q9NRX2 175 aaKnown RBP13.9□□□□□ -0.18
VAMP1-206ENST00000538970 PPP4R2Q9NY27 417 aa13.9□□□□□ -0.18
VAMP1-206ENST00000538970 CACNA1HO95180 2353 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 USO1O60763 962 aaKnown RBP13.89□□□□□ -0.19
VAMP1-206ENST00000538970 KRT37O76014 449 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 URODP06132 367 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 ASGR2P07307 311 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 SPATA31C1P0DKV0 1188 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 OR1G1P47890 313 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 TAS1R1Q7RTX1 841 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 RPS6KC1Q96S38 1066 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 APOL6Q9BWW8 343 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 TRIM6Q9C030 488 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms