RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 IPPQ9Y573 584 aa21.9■■□□□ 1.1
TNFRSF1B-204ENST00000536782 INO80B-WBP1J3KQ70 363 aa21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 NEMFO60524 1076 aa21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 SSBP05455 408 aaKnown RBP eCLIP21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 KLRC2P26717 231 aa21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 TXKP42681 527 aa21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 PTPN5P54829 565 aa21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 MTMR3Q13615 1198 aa21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 KANK3Q6NY19 840 aa21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 IFNLR1Q8IU57 520 aaPredicted RBP21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 DIS3L2Q8IYB7 885 aaKnown RBP21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 UBALD2Q8IYN6 164 aa21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 KLHL5Q96PQ7 755 aa21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 EIF2AQ9BY44 585 aaKnown RBP21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 MRPL17Q9NRX2 175 aaKnown RBP21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 DENND4AQ7Z401 1863 aa21.89■■□□□ 1.09
TNFRSF1B-204ENST00000536782 CFAP54Q96N23 3096 aa21.88■■□□□ 1.09
TNFRSF1B-204ENST00000536782 ARID2Q68CP9 1835 aa21.88■■□□□ 1.09
TNFRSF1B-204ENST00000536782 ZFHX2Q9C0A1 2572 aaPredicted RBP21.88■■□□□ 1.09
TNFRSF1B-204ENST00000536782 SPDYE4A6NLX3 237 aa21.88■■□□□ 1.09
TNFRSF1B-204ENST00000536782 TMC5Q6UXY8 1006 aa21.88■■□□□ 1.09
TNFRSF1B-204ENST00000536782 TDRD5Q8NAT2 981 aaKnown RBP21.88■■□□□ 1.09
TNFRSF1B-204ENST00000536782 ASAP3Q8TDY4 903 aa21.88■■□□□ 1.09
TNFRSF1B-204ENST00000536782 CPB2Q96IY4 423 aa21.88■■□□□ 1.09
TNFRSF1B-204ENST00000536782 CSRNP2Q9H175 543 aa21.88■■□□□ 1.09
TNFRSF1B-204ENST00000536782 SFXN1Q9H9B4 322 aa21.88■■□□□ 1.09
TNFRSF1B-204ENST00000536782 C2orf16Q68DN1 1984 aa21.88■■□□□ 1.09
TNFRSF1B-204ENST00000536782 ARL5CA6NH57 179 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 INPPL1O15357 1258 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 JAK2O60674 1132 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 CNPP09543 421 aaKnown RBP21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 ARL2P36404 184 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 CLCN4P51793 760 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 NEK4P51957 841 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 FOSBP53539 338 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 MBTD1Q05BQ5 628 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 CAPSQ13938 189 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 COLGALT2Q8IYK4 626 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 ZDHHC14Q8IZN3 488 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 PLCD3Q8N3E9 789 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 MTMR9Q96QG7 549 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 GAD1Q99259 594 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 NFKBIZQ9BYH8 718 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 RNF39Q9H2S5 420 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 USTQ9Y2C2 406 aa21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 PRG3Q9Y2Y8 225 aaPredicted RBP21.87■■□□□ 1.09
TNFRSF1B-204ENST00000536782 WNT7AO00755 349 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 EIF5BO60841 1220 aaKnown RBP21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 LILRB3O75022 631 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 SOD2P04179 222 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 URODP06132 367 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 AVPR2P30518 371 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 MLH1P40692 756 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 OR1G1P47890 313 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 RARRES1P49788 294 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 VCPP55072 806 aaKnown RBP21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 TCF15Q12870 199 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 GPR149Q86SP6 731 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 HACE1Q8IYU2 909 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 PIGOQ8TEQ8 1089 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 TRIM6Q9C030 488 aaPredicted RBP21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 SSX2IPQ9Y2D8 614 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 HES2Q9Y543 173 aa21.86■■□□□ 1.09
TNFRSF1B-204ENST00000536782 C2CD2LO14523 706 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 NR1I2O75469 434 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 BRD1O95696 1058 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 XRCC6P12956 609 aaKnown RBP eCLIP21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 ARF4P18085 180 aaPredicted RBP21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 GLRA2P23416 452 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 AMHR2Q16671 573 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 FEZF2Q8TBJ5 459 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 ZFP42Q96MM3 310 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 HERC2P3Q9BVR0 1158 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 APOL6Q9BWW8 343 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 MARCH5Q9NX47 278 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 LIMD1Q9UGP4 676 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 GIT1Q9Y2X7 761 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 PLXNA3P51805 1871 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 VPS13AQ96RL7 3174 aa21.85■■□□□ 1.09
TNFRSF1B-204ENST00000536782 MYO15AQ9UKN7 3530 aa21.84■■□□□ 1.09
TNFRSF1B-204ENST00000536782 POTEMA6NI47 508 aa21.84■■□□□ 1.09
TNFRSF1B-204ENST00000536782 ASGR2P07307 311 aa21.84■■□□□ 1.09
TNFRSF1B-204ENST00000536782 SCNN1GP51170 649 aa21.84■■□□□ 1.09
TNFRSF1B-204ENST00000536782 DSC1Q08554 894 aa21.84■■□□□ 1.09
TNFRSF1B-204ENST00000536782 RPS6KC1Q96S38 1066 aa21.84■■□□□ 1.09
TNFRSF1B-204ENST00000536782 POLR3FQ9H1D9 316 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF1B-204ENST00000536782 MIOSQ9NXC5 875 aa21.84■■□□□ 1.09
TNFRSF1B-204ENST00000536782 RIF1Q5UIP0 2472 aaKnown RBP21.84■■□□□ 1.09
TNFRSF1B-204ENST00000536782 A0A087WWV3 80 aa21.83■■□□□ 1.09
TNFRSF1B-204ENST00000536782 USO1O60763 962 aaKnown RBP21.83■■□□□ 1.09
TNFRSF1B-204ENST00000536782 PDGFBP01127 241 aaPredicted RBP21.83■■□□□ 1.09
TNFRSF1B-204ENST00000536782 ADH1AP07327 375 aa21.83■■□□□ 1.09
TNFRSF1B-204ENST00000536782 SAFBQ15424 915 aaKnown RBP eCLIP21.83■■□□□ 1.09
TNFRSF1B-204ENST00000536782 SLC27A1Q6PCB7 646 aa21.83■■□□□ 1.09
TNFRSF1B-204ENST00000536782 CCDC149Q6ZUS6 474 aa21.83■■□□□ 1.09
TNFRSF1B-204ENST00000536782 TAS1R1Q7RTX1 841 aa21.83■■□□□ 1.09
TNFRSF1B-204ENST00000536782 ACSF2Q96CM8 615 aaPredicted RBP21.83■■□□□ 1.09
TNFRSF1B-204ENST00000536782 NXF3Q9H4D5 531 aaKnown RBP21.83■■□□□ 1.09
TNFRSF1B-204ENST00000536782 B4GALT5O43286 388 aa21.82■■□□□ 1.08
TNFRSF1B-204ENST00000536782 SPATA31C1P0DKV0 1188 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms