RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 LSM7Q9UK45 103 aaKnown RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 AGAP1Q9UPQ3 857 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 NRKQ7Z2Y5 1582 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 EMSYQ7Z589 1322 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 H3BRJ5 948 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 OPHN1O60890 802 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 KRT38O76015 456 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ACSL3O95573 720 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 TRIM49P0CI25 452 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 TRIM49CP0CI26 452 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 CYP2C9P11712 490 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ATICP31939 592 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 SSTR3P32745 418 aaPredicted RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 CUL1Q13616 776 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 TADA2BQ86TJ2 420 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 SNX19Q92543 992 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 DACT3Q96B18 629 aaPredicted RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 NUP85Q9BW27 656 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 SUN2Q9UH99 717 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 PRR12Q9ULL5 1215 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 E5RI56 91 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 SRGAP2O75044 1071 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 HSPA4LO95757 839 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 NCF2P19878 526 aaPredicted RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 FBXW4P57775 412 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 GBP5Q96PP8 586 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 CNOT10Q9H9A5 744 aaKnown RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ITM2BQ9Y287 266 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 SNX9Q9Y5X1 595 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 PFASO15067 1338 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 MYBL1P10243 752 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ITGA4P13612 1032 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 OR1G1P47890 313 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 CCT5P48643 541 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 GTF2A2P52657 109 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ATP2C1P98194 919 aaPredicted RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 AP1B1Q10567 949 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ART3Q13508 389 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 PDIA5Q14554 519 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ZNF235Q14590 738 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ZNF746Q6NUN9 644 aaPredicted RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 TAS2R42Q7RTR8 314 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 RMDN1Q96DB5 314 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 TSR3Q9UJK0 312 aaKnown RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 PI4K2BG5E9Z4 385 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ASMTLO95671 621 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 HMBSP08397 361 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 IFNA8P32881 189 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 RBP5P82980 135 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 APPL2Q8NEU8 664 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 DPF3Q92784 378 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 PBXIP1Q96AQ6 731 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ULK4Q96C45 1275 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ZNF512Q96ME7 567 aaPredicted RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 SEPT5Q99719 369 aaPredicted RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 AFF4Q9UHB7 1163 aaKnown RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 DFFAO00273 331 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 COPEO14579 308 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 SMIM24O75264 130 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 NTSR2O95665 410 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 FTLP02792 175 aaPredicted RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 NOP14P78316 857 aaKnown RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 SLC7A5Q01650 507 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ANKRD20A4Q4UJ75 823 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ANKRD20A8PQ5CZ79 823 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ANKRD20A2Q5SQ80 823 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 THEMIS2Q5TEJ8 643 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 ANKRD20A1Q5TYW2 823 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 SMAP1Q8IYB5 467 aaPredicted RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 AGBL3Q8NEM8 1001 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 SCFD2Q8WU76 684 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 BFARQ9NZS9 450 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 NOVA2Q9UNW9 492 aaKnown RBP6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 SNX24Q9Y343 169 aa6.79□□□□□ -1.32
UBQLN1-206ENST00000533705 CNTNAP4Q9C0A0 1308 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 ADGRB3O60242 1522 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 POLRMTO00411 1230 aaKnown RBP6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 NMT1P30419 496 aaKnown RBP6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 PRAMEP78395 509 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 ADCY2Q08462 1091 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 SEMA3FQ13275 785 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 DGKDQ16760 1214 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 C6orf118Q5T5N4 469 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 CDKL3Q8IVW4 592 aaPredicted RBP6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 CHST13Q8NET6 341 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 TTC8Q8TAM2 541 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 ZKSCAN4Q969J2 545 aaPredicted RBP6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 ABHD10Q9NUJ1 306 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 PIK3R2O00459 728 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 PDXKO00764 312 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 CSF1RP07333 972 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 SMARCA1P28370 1054 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 HSD17B4P51659 736 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 LRRC43Q8N309 656 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 OR6P1Q8NGX9 317 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 CCDC124Q96CT7 223 aaKnown RBP6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 ATG4CQ96DT6 458 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 DDX27Q96GQ7 796 aaKnown RBP6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 NDFIP2Q9NV92 336 aa6.78□□□□□ -1.32
UBQLN1-206ENST00000533705 DDX56Q9NY93 547 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms