RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 GBP3Q9H0R5 595 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 CSRNP2Q9H175 543 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 UBN1Q9NPG3 1134 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 KANSL3Q9P2N6 904 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 DBR1Q9UK59 544 aaKnown RBP12.56□□□□□ -0.4
CLCF1-202ENST00000533438 IPPQ9Y573 584 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 DENND4AQ7Z401 1863 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 ZNF318Q5VUA4 2279 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 TECTAO75443 2155 aa12.55□□□□□ -0.4
CLCF1-202ENST00000533438 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.55□□□□□ -0.4
CLCF1-202ENST00000533438 INO80B-WBP1J3KQ70 363 aa12.55□□□□□ -0.4
CLCF1-202ENST00000533438 USO1O60763 962 aaKnown RBP12.55□□□□□ -0.4
CLCF1-202ENST00000533438 CXCL14O95715 111 aa12.55□□□□□ -0.4
CLCF1-202ENST00000533438 OR52Z1P0C646 297 aa12.55□□□□□ -0.4
CLCF1-202ENST00000533438 ITGA4P13612 1032 aa12.55□□□□□ -0.4
CLCF1-202ENST00000533438 ARF4P18085 180 aaPredicted RBP12.55□□□□□ -0.4
CLCF1-202ENST00000533438 RPA1P27694 616 aa12.55□□□□□ -0.4
CLCF1-202ENST00000533438 GIT2Q14161 759 aa12.55□□□□□ -0.4
CLCF1-202ENST00000533438 BMS1Q14692 1282 aaKnown RBP12.55□□□□□ -0.4
CLCF1-202ENST00000533438 ZNF174Q15697 407 aa12.55□□□□□ -0.4
CLCF1-202ENST00000533438 NOSTRINQ8IVI9 506 aa12.55□□□□□ -0.4
CLCF1-202ENST00000533438 AUTS2Q8WXX7 1259 aa12.55□□□□□ -0.4
CLCF1-202ENST00000533438 CCDC43Q96MW1 224 aaKnown RBP12.55□□□□□ -0.4
CLCF1-202ENST00000533438 POLR3FQ9H1D9 316 aaPredicted RBP12.55□□□□□ -0.4
CLCF1-202ENST00000533438 RNF39Q9H2S5 420 aa12.55□□□□□ -0.4
CLCF1-202ENST00000533438 CFAP54Q96N23 3096 aa12.55□□□□□ -0.4
CLCF1-202ENST00000533438 ARL5CA6NH57 179 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 NRP1O14786 923 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 B4GALT5O43286 388 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 POMCP01189 267 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 MUTP22033 750 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 U2AF2P26368 475 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLCF1-202ENST00000533438 TRAPPC10P48553 1259 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 ZXDAP98168 799 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 ITIH3Q06033 890 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 DSC1Q08554 894 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 NCBP1Q09161 790 aaKnown RBP12.54□□□□□ -0.4
CLCF1-202ENST00000533438 CUL4AQ13619 759 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 PTPN14Q15678 1187 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 TPRNQ4KMQ1 711 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 TTC38Q5R3I4 469 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 CDCA2Q69YH5 1023 aaPredicted RBP12.54□□□□□ -0.4
CLCF1-202ENST00000533438 POTEGQ6S5H5 508 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 COLGALT2Q8IYK4 626 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 C4orf32Q8N8J7 132 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 PRSS33Q8NF86 280 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 RPGRIP1Q96KN7 1286 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 SNX27Q96L92 541 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 NACC1Q96RE7 527 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 APOL5Q9BWW9 433 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 GPRC5CQ9NQ84 441 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 MARCH5Q9NX47 278 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 MIOSQ9NXC5 875 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 STK39Q9UEW8 545 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 CDH22Q9UJ99 828 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 FAN1Q9Y2M0 1017 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 HES2Q9Y543 173 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 PLXNA3P51805 1871 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 C2orf16Q68DN1 1984 aa12.54□□□□□ -0.4
CLCF1-202ENST00000533438 A0A1B0GUA9 196 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 TMEM221A6NGB7 291 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 M0R296 226 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 LILRB3O75022 631 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 EFEMP2O95967 443 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 ALDH2P05091 517 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 CA8P35219 290 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 MLH1P40692 756 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 FXR2P51116 673 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLCF1-202ENST00000533438 NUBP1P53384 320 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 PTPN5P54829 565 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 TCF15Q12870 199 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 IER5LQ5T953 404 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 SLC27A1Q6PCB7 646 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 PPP4R3CPQ6ZMV5 832 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 MAEAQ7L5Y9 396 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 RNF168Q8IYW5 571 aaPredicted RBP12.53□□□□□ -0.4
CLCF1-202ENST00000533438 FAM184AQ8NB25 1140 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 MCPH1Q8NEM0 835 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 ERMNQ8TAM6 284 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 SLC22A17Q8WUG5 538 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 ZFP42Q96MM3 310 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 IPO9Q96P70 1041 aaKnown RBP12.53□□□□□ -0.4
CLCF1-202ENST00000533438 FAM193BQ96PV7 902 aaPredicted RBP12.53□□□□□ -0.4
CLCF1-202ENST00000533438 GAD1Q99259 594 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 ADAM7Q9H2U9 754 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 NXF3Q9H4D5 531 aaKnown RBP12.53□□□□□ -0.4
CLCF1-202ENST00000533438 GIT1Q9Y2X7 761 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 ZMYM2Q9UBW7 1377 aa12.53□□□□□ -0.4
CLCF1-202ENST00000533438 LRRIQ4A6NIV6 560 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 SOD2P04179 222 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 EPCAMP16422 314 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 TOB1P50616 345 aaPredicted RBP12.52□□□□□ -0.41
CLCF1-202ENST00000533438 SCNN1GP51170 649 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 NBR1Q14596 966 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 ECM1Q16610 540 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 FAM187BQ17R55 369 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 HAUS3Q68CZ6 603 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 CDR2LQ86X02 465 aaPredicted RBP12.52□□□□□ -0.41
CLCF1-202ENST00000533438 GSTCDQ8NEC7 633 aa12.52□□□□□ -0.41
CLCF1-202ENST00000533438 BSNDQ8WZ55 320 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms