RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 CAAP1Q9H8G2 361 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 SPON1Q9HCB6 807 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 OLA1Q9NTK5 396 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 PIM2Q9P1W9 311 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 ANAPC5Q9UJX4 755 aa7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 EPN1Q9Y6I3 576 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-210ENST00000533089 CCT8L1PA6NM43 557 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 GNA14O95837 355 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 KRT16P08779 473 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 ARHGAP4P98171 946 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 PPP1R2P3Q6NXS1 205 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 TRPM8Q7Z2W7 1104 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 SFR1Q86XK3 245 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 FAM178BQ8IXR5 827 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 BLIDQ8IZY5 108 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 SERPINI1Q99574 410 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 LMCD1Q9NZU5 365 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 HPCAL4Q9UM19 191 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 EPHB1P54762 984 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 TMEM63BQ5T3F8 832 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 EEPD1Q7L9B9 569 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 ZBTB33Q86T24 672 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 MYOCDQ8IZQ8 938 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 OR8K1Q8NGG5 319 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 MLXIPLQ9NP71 852 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 DMAP1Q9NPF5 467 aaPredicted RBP7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 ATPIF1Q9UII2 106 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 L3MBTL1Q9Y468 752 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 ZNF804BA4D1E1 1349 aa7.4□□□□□ -1.23
TGFBR3-210ENST00000533089 KLRF2D3W0D1 207 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 NQO1P15559 274 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 PTPREP23469 700 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 STAT1P42224 750 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 CYP4A11Q02928 519 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 RARS2Q5T160 578 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 TRIM67Q6ZTA4 783 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 AGGF1Q8N302 714 aaeCLIP7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 PPM1KQ8N3J5 372 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 PNMA1Q8ND90 353 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 VPS37AQ8NEZ2 397 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 ANKRD27Q96NW4 1050 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 KIAA1468Q9P260 1216 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 SERTAD1Q9UHV2 236 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 PNMA6EA0A0J9YXQ4 647 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 H0YCG3 227 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 KPNA4O00629 521 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 EIF3BP55884 814 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 SUPT20HL1Q3ZLR7 823 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 TOGARAM2Q6ZUX3 1019 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 UTS2BQ765I0 119 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 CDR2LQ86X02 465 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 EDC3Q96F86 508 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 GREM2Q9H772 168 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 PARVAQ9NVD7 372 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 AMFRQ9UKV5 643 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 KLHL20Q9Y2M5 609 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 NOTOA8MTQ0 251 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 JAK2O60674 1132 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 RAD17O75943 681 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 CCDC149Q6ZUS6 474 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 TRAPPC9Q96Q05 1148 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 VIPAS39Q9H9C1 493 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 UBN1Q9NPG3 1134 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 ORC6Q9Y5N6 252 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 PASKQ96RG2 1323 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 ATP10DQ9P241 1426 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 GTPBP10A4D1E9 387 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 H3BQF6 201 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 SRGAP2O75044 1071 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 GDF11O95390 407 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 ZNF18P17022 549 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 PRPSAP1Q14558 356 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 KRT26Q7Z3Y9 468 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 IFNL3Q8IZI9 196 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 IPO11Q9UI26 975 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 CDHR2Q9BYE9 1310 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 ZNF839A8K0R7 811 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 INO80B-WBP1J3KQ70 363 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 WDR47O94967 919 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 POLR2BP30876 1174 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 CASP14P31944 242 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 CASP2P42575 452 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 PLTPP55058 493 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 RASSF7Q02833 373 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 JADE1Q6IE81 842 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 CATSPER1Q8NEC5 780 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 ARHGEF1Q92888 912 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 HDAC11Q96DB2 347 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 DEPDC7Q96QD5 511 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 INO80BQ9C086 356 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 FAM192AQ9GZU8 254 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 C12orf4Q9NQ89 552 aa7.39□□□□□ -1.23
TGFBR3-210ENST00000533089 GNGT2O14610 69 aa7.38□□□□□ -1.23
TGFBR3-210ENST00000533089 ACTN1P12814 892 aa7.38□□□□□ -1.23
TGFBR3-210ENST00000533089 FLT3P36888 993 aa7.38□□□□□ -1.23
TGFBR3-210ENST00000533089 ADCY8P40145 1251 aa7.38□□□□□ -1.23
TGFBR3-210ENST00000533089 RBL2Q08999 1139 aa7.38□□□□□ -1.23
TGFBR3-210ENST00000533089 KCTD1Q719H9 257 aa7.38□□□□□ -1.23
TGFBR3-210ENST00000533089 GALNT4Q8N4A0 578 aa7.38□□□□□ -1.23
TGFBR3-210ENST00000533089 ZWILCHQ9H900 591 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms