RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 NFKBIBQ15653 356 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 L1TD1Q5T7N2 865 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 SLC27A1Q6PCB7 646 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 MAP4K3Q8IVH8 894 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 SYCP3Q8IZU3 236 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 ZNF507Q8TCN5 953 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 GPT2Q8TD30 523 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 LINC01599Q8WXQ3 324 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 TOP1MTQ969P6 601 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 SLC9A7Q96T83 725 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 ADPGKQ9BRR6 497 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 ELAC1Q9H777 363 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 TMEM206Q9H813 350 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 FAM105AQ9NUU6 356 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 TNFSF13BQ9Y275 285 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 PCDHB2Q9Y5E7 798 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 PCDHA5Q9Y5H7 936 aa12.33□□□□□ -0.44
TRAPPC4-211ENST00000533012 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 A0A1W2PPC1 479 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 TTLL13PA6NNM8 815 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 HNRNPDLO14979 420 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 EIF3DO15371 548 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 CLDN3O15551 220 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 TOM1L1O75674 476 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 KIF20AO95235 890 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 MATR3P43243 847 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 CASP5P51878 434 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 DEFB103AP81534 67 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 STK4Q13043 487 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 SLFN12LQ6IEE8 588 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 CDR2LQ86X02 465 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 ECHDC2Q86YB7 292 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 NPAS4Q8IUM7 802 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 HACE1Q8IYU2 909 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 SPATA20Q8TB22 786 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 ERCC4Q92889 916 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 PGBD4Q96DM1 585 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 GTPBP4Q9BZE4 634 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 NUP62CLQ9H1M0 184 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 CLSTN2Q9H4D0 955 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 PDZD7Q9H5P4 517 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 PTPRHQ9HD43 1115 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 TMEM161AQ9NX61 479 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 LTBP2Q14767 1821 aa12.32□□□□□ -0.44
TRAPPC4-211ENST00000533012 NPTXRO95502 500 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 PIGRP01833 764 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 EDN1P05305 212 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 KCNA1Q09470 495 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 DCAF4L1Q3SXM0 396 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 UBXN11Q5T124 520 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 MPZL3Q6UWV2 235 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 EPM2AIP1Q7L775 607 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 MRPL10Q7Z7H8 261 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 HERC6Q8IVU3 1022 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 RNF169Q8NCN4 708 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 SCFD1Q8WVM8 642 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 EIF2AQ9BY44 585 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 FGFBP2Q9BYJ0 223 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 KIAA1468Q9P260 1216 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 TANC1Q9C0D5 1861 aa12.31□□□□□ -0.44
TRAPPC4-211ENST00000533012 HOXA2O43364 376 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 GJB5O95377 273 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 MCF2P10911 925 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 ITGA4P13612 1032 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 PROZP22891 400 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 KNOP1Q1ED39 458 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 ZNF568Q3ZCX4 644 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 ZNF658Q5TYW1 1059 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 EEF1DP3Q658K8 133 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 FAM117BQ6P1L5 589 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 TMCO2Q7Z6W1 182 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 ZBTB33Q86T24 672 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 CRIPAKQ8N1N5 446 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 KIAA0895Q8NCT3 520 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 GLIS3Q8NEA6 775 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 ZBTB45Q96K62 511 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 RAD9AQ99638 391 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 UBN1Q9NPG3 1134 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 ANKFY1Q9P2R3 1169 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 MAN1B1Q9UKM7 699 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 IPPQ9Y573 584 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 UBE4BO95155 1302 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 SCN5AQ14524 2016 aa12.3□□□□□ -0.44
TRAPPC4-211ENST00000533012 GRXCR1A8MXD5 290 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 ANKRD63C9JTQ0 380 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 TLL1O43897 1013 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 DGKIO75912 1065 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 SNRPFP62306 86 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 MCL1Q07820 350 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 BMT2Q1RMZ1 405 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 ISM2Q6H9L7 571 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 HS2ST1Q7LGA3 356 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 ZNF598Q86UK7 904 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 NELFCDQ8IXH7 590 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 ABI1Q8IZP0 508 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 SMG8Q8ND04 991 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 POMGNT1Q8WZA1 660 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms