RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 C21orf2O43822 256 aa10.07□□□□□ -0.8
BDNF-216ENST00000532997 DKC1O60832 514 aaKnown RBP eCLIP10.07□□□□□ -0.8
BDNF-216ENST00000532997 GZMAP12544 262 aa10.07□□□□□ -0.8
BDNF-216ENST00000532997 SCNN1DP51172 638 aa10.07□□□□□ -0.8
BDNF-216ENST00000532997 TCP10Q12799 353 aa10.07□□□□□ -0.8
BDNF-216ENST00000532997 FAM98CQ17RN3 349 aaKnown RBP10.07□□□□□ -0.8
BDNF-216ENST00000532997 MUM1Q2TAK8 710 aa10.07□□□□□ -0.8
BDNF-216ENST00000532997 RINT1Q6NUQ1 792 aa10.07□□□□□ -0.8
BDNF-216ENST00000532997 AGGF1Q8N302 714 aaeCLIP10.07□□□□□ -0.8
BDNF-216ENST00000532997 EPS8L3Q8TE67 593 aaKnown RBP10.07□□□□□ -0.8
BDNF-216ENST00000532997 C18orf8Q96DM3 657 aa10.07□□□□□ -0.8
BDNF-216ENST00000532997 SAAL1Q96ER3 474 aa10.07□□□□□ -0.8
BDNF-216ENST00000532997 FNBP1Q96RU3 617 aa10.07□□□□□ -0.8
BDNF-216ENST00000532997 NEUROG2Q9H2A3 272 aa10.07□□□□□ -0.8
BDNF-216ENST00000532997 ETNK1Q9HBU6 452 aa10.07□□□□□ -0.8
BDNF-216ENST00000532997 PCYOX1Q9UHG3 505 aa10.07□□□□□ -0.8
BDNF-216ENST00000532997 FAM170AA1A519 330 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 IGF2BP3O00425 579 aaKnown RBP eCLIP10.06□□□□□ -0.8
BDNF-216ENST00000532997 RIPK2O43353 540 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 SREBF1P36956 1147 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 SRRM1Q8IYB3 904 aaKnown RBP10.06□□□□□ -0.8
BDNF-216ENST00000532997 TMEM109Q9BVC6 243 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 SEMA4AQ9H3S1 761 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 PCIF1Q9H4Z3 704 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 AGPAT3Q9NRZ7 376 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 RASA4BC9J798 803 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 H0YGN5 161 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 RASA4O43374 803 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 COPB2P35606 906 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 GCLMP48507 274 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 ECM1Q16610 540 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 CLEC10AQ8IUN9 316 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 ARMC2Q8NEN0 867 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 RUSC1Q9BVN2 902 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 MRPL47Q9HD33 250 aaKnown RBP10.06□□□□□ -0.8
BDNF-216ENST00000532997 RAB20Q9NX57 234 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 RGL1Q9NZL6 768 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 TBK1Q9UHD2 729 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 KCNG1Q9UIX4 513 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 GTF3C4Q9UKN8 822 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 NFS1Q9Y697 457 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 HNRNPCL1O60812 293 aaKnown RBP10.06□□□□□ -0.8
BDNF-216ENST00000532997 DIAPH2O60879 1101 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 UBOX5O94941 541 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 IL1R1P14778 569 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 SLC1A1P43005 524 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 KCNQ4P56696 695 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 NFIXQ14938 502 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 LONRF1Q17RB8 773 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 WLSQ5T9L3 541 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 CAPRIN2Q6IMN6 1127 aaKnown RBP10.06□□□□□ -0.8
BDNF-216ENST00000532997 ATL2Q8NHH9 583 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 LNX1Q8TBB1 728 aaPredicted RBP10.06□□□□□ -0.8
BDNF-216ENST00000532997 MIEF2Q96C03 454 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 LRRC37BQ96QE4 947 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 ANAPC7Q9UJX3 599 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 STXBP5LQ9Y2K9 1186 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 CACNA1SQ13698 1873 aa10.06□□□□□ -0.8
BDNF-216ENST00000532997 RSPH10B2B2RC85 870 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 DDX39AO00148 427 aaKnown RBP10.05□□□□□ -0.8
BDNF-216ENST00000532997 DNM1LO00429 736 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 KCNQ2O43526 872 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 ANP32DO95626 131 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 RSPH10BP0C881 870 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 SNHG28P0DPA3 235 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 MYBL1P10243 752 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 HOXA13P31271 388 aaPredicted RBP10.05□□□□□ -0.8
BDNF-216ENST00000532997 FLT3P36888 993 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 RPL21P46778 160 aaKnown RBP10.05□□□□□ -0.8
BDNF-216ENST00000532997 ANKRD20A3Q5VUR7 823 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 TRIM68Q6AZZ1 485 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 ZNF746Q6NUN9 644 aaPredicted RBP10.05□□□□□ -0.8
BDNF-216ENST00000532997 ZC3H3Q8IXZ2 948 aaKnown RBP10.05□□□□□ -0.8
BDNF-216ENST00000532997 VPS52Q8N1B4 723 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 CCDC127Q96BQ5 260 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 ZBTB21Q9ULJ3 1066 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 C15orf41Q9Y2V0 281 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 USH1CQ9Y6N9 552 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 A0A1B0GUL6 1792 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 PLIN4Q96Q06 1357 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 MGRN1O60291 552 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 SNX3O60493 162 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 DLATP10515 647 aaKnown RBP10.05□□□□□ -0.8
BDNF-216ENST00000532997 CASP5P51878 434 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 JAM2P57087 298 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 SNRPFP62306 86 aaKnown RBP10.05□□□□□ -0.8
BDNF-216ENST00000532997 CYP4F22Q6NT55 531 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 MIGA2Q7L4E1 593 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 DNAAF5Q86Y56 855 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 TEX9Q8N6V9 391 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 RBM46Q8TBY0 533 aaKnown RBP10.05□□□□□ -0.8
BDNF-216ENST00000532997 ARHGEF1Q92888 912 aaKnown RBP10.05□□□□□ -0.8
BDNF-216ENST00000532997 PPCSQ9HAB8 311 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 RXFP1Q9HBX9 757 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 USTQ9Y2C2 406 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 GAKO14976 1311 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 RREB1Q92766 1687 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 F5H6K3 240 aa10.05□□□□□ -0.8
BDNF-216ENST00000532997 FOXN3O00409 490 aaPredicted RBP10.05□□□□□ -0.8
BDNF-216ENST00000532997 MSH4O15457 936 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms