RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TMCC1O94876 653 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 ALDH7A1P49419 539 aaKnown RBP11.42□□□□□ -0.58
COLCA1-203ENST00000532918 ETF1P62495 437 aaKnown RBP11.42□□□□□ -0.58
COLCA1-203ENST00000532918 GPC5P78333 572 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 NOTUMQ6P988 496 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 CENPUQ71F23 418 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 DDX53Q86TM3 631 aaKnown RBP11.42□□□□□ -0.58
COLCA1-203ENST00000532918 LRRC8AQ8IWT6 810 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 ALDH8A1Q9H2A2 487 aaPredicted RBP11.42□□□□□ -0.58
COLCA1-203ENST00000532918 DDX56Q9NY93 547 aaKnown RBP11.42□□□□□ -0.58
COLCA1-203ENST00000532918 SH3BP1Q9Y3L3 701 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 CAP2P40123 477 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 ALDH1A3P47895 512 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 PPP4CP60510 307 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 EMC2Q15006 297 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 DPCR1Q3MIW9 517 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 FBXL13Q8NEE6 735 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 PIK3C2BO00750 1634 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 TDP2O95551 362 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 IFNA8P32881 189 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 HSD17B4P51659 736 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 SNRPFP62306 86 aaKnown RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 ZNF235Q14590 738 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 USP50Q70EL3 339 aaPredicted RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 FAF2Q96CS3 445 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 TMEM169Q96HH4 297 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 LRG1P02750 347 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 DCAF4L1Q3SXM0 396 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 SPATS2Q86XZ4 545 aaKnown RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 DCLK2Q8N568 766 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 TBC1D19Q8N5T2 526 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 ATG4CQ96DT6 458 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 ZNF668Q96K58 619 aaPredicted RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 EPAS1Q99814 870 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 MXRA8Q9BRK3 442 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 PCDHA13Q9Y5I0 950 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 MT-ND3P03897 115 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 DDX5P17844 614 aaKnown RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 GUCY2DQ02846 1103 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 GTF2H3Q13889 308 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 GPC2Q8N158 579 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 GUF1Q8N442 669 aaKnown RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 ZC3H15Q8WU90 426 aaKnown RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 ABTB1Q969K4 478 aaPredicted RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 LRGUKQ96M69 825 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 TSSK1BQ9BXA7 367 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 EIF2AQ9BY44 585 aaKnown RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 ANAPC7Q9UJX3 599 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 PPP1R9AQ9ULJ8 1098 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 SATB2Q9UPW6 733 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 SLC4A7Q9Y6M7 1214 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 CREB3O43889 395 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 MOCS2O96007 188 aaPredicted RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 PNPLA4P41247 253 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 TOB2Q14106 344 aaPredicted RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 FAM117BQ6P1L5 589 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 INTS5Q6P9B9 1019 aaKnown RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 CDKL3Q8IVW4 592 aaPredicted RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 ZDHHC15Q96MV8 337 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 INTS2Q9H0H0 1204 aaKnown RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 PLEKHA4Q9H4M7 779 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 EVI5O60447 810 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 SNX2O60749 519 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 ZRANB2O95218 330 aaKnown RBP eCLIP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 NR1H3Q13133 447 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 ZNF484Q5JVG2 852 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 ARHGAP18Q8N392 663 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 MED15Q96RN5 788 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 TRIM54Q9BYV2 358 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 OLA1Q9NTK5 396 aaKnown RBP11.41□□□□□ -0.58
COLCA1-203ENST00000532918 ABCF3Q9NUQ8 709 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 AGAP1Q9UPQ3 857 aa11.41□□□□□ -0.58
COLCA1-203ENST00000532918 PXDNLA1KZ92 1463 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 IQANK1A0A1B0GTG1 560 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 ARHGAP42A6NI28 874 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 CXCL11O14625 94 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 SRGNP10124 158 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 OAS2P29728 719 aaKnown RBP11.4□□□□□ -0.58
COLCA1-203ENST00000532918 BACE1P56817 501 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 TMEM132BQ14DG7 1078 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 MAPRE1Q15691 268 aaKnown RBP11.4□□□□□ -0.58
COLCA1-203ENST00000532918 STAG2Q8N3U4 1231 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 MYRIPQ8NFW9 859 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 DRC3Q9H069 523 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 NR2E3Q9Y5X4 410 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 PPRC1Q5VV67 1664 aaKnown RBP11.4□□□□□ -0.58
COLCA1-203ENST00000532918 OR1G1P47890 313 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 INPP1P49441 399 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 KCNH2Q12809 1159 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 ALKBH8Q96BT7 664 aaKnown RBP11.4□□□□□ -0.58
COLCA1-203ENST00000532918 SAAL1Q96ER3 474 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 PANX2Q96RD6 677 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 TRIM45Q9H8W5 580 aaPredicted RBP11.4□□□□□ -0.58
COLCA1-203ENST00000532918 LRRC7Q96NW7 1537 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 SETD1BQ9UPS6 1966 aaKnown RBP11.4□□□□□ -0.58
COLCA1-203ENST00000532918 PDXKO00764 312 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 SLC16A3O15427 465 aaKnown RBP11.4□□□□□ -0.58
COLCA1-203ENST00000532918 ICAM1P05362 532 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 RASA1P20936 1047 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms