RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 HAS1Q92839 578 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 WNT8BQ93098 351 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 IFT43Q96FT9 208 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 FAM167AQ96KS9 214 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 FTOQ9C0B1 505 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 MTIF3Q9H2K0 278 aaKnown RBP6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 ETNK1Q9HBU6 452 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 KCNMB3Q9NPA1 279 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 TMPRSS4Q9NRS4 437 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 ADAMTS1Q9UHI8 967 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 TUBE1Q9UJT0 475 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 NOL7Q9UMY1 257 aaKnown RBP6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 SCN10AQ9Y5Y9 1956 aa6.47□□□□□ -1.37
HMGB1P42-201ENST00000532126 CCDC189A1A4V9 331 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 MBLAC1A4D2B0 266 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 RSPH10B2B2RC85 870 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 SOX1O00570 391 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 TSPAN6O43657 245 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 LDHAP00338 332 aaKnown RBP6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 RPLP2P05387 115 aaKnown RBP6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 RSPH10BP0C881 870 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 ATP4AP20648 1035 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 FSHRP23945 695 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 U2AF2P26368 475 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 KLRC1P26715 233 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 GBP2P32456 591 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 MCM7P33993 719 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 TRAPPC10P48553 1259 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 WNT7BP56706 349 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 PPP2R5CQ13362 524 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 CUL4AQ13619 759 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 NFE2Q16621 373 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 DDR2Q16832 855 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 ZNF484Q5JVG2 852 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 TBCELQ5QJ74 424 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 TTC38Q5R3I4 469 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 LARP1BQ659C4 914 aaKnown RBP6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 MCTP1Q6DN14 999 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 NCAPH2Q6IBW4 605 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 PPP4R4Q6NUP7 873 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 B3GNT9Q6UX72 402 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 RUFY4Q6ZNE9 571 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 EPS8L3Q8TE67 593 aaKnown RBP6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 SNX29Q8TEQ0 813 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 TRAPPC12Q8WVT3 735 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 HERVK_113Q902F9 699 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 ZBTB10Q96DT7 871 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 TMEM74Q96NL1 305 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 FAM49AQ9H0Q0 323 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 NRBP2Q9NSY0 501 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 VAV3Q9UKW4 847 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 PCDHA12Q9UN75 941 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 CEP131Q9UPN4 1083 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 PCDHA2Q9Y5H9 948 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 IGSF9BQ9UPX0 1349 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 LTBP2Q14767 1821 aa6.46□□□□□ -1.38
HMGB1P42-201ENST00000532126 COL1A2P08123 1366 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 SMIM35A0A1B0GVV1 85 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 SERTM1A2A2V5 107 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 ZBTB42B2RXF5 422 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 KIF28PB7ZC32 967 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 M0QZ92 97 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 EML1O00423 815 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 IFRD1O00458 451 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 WNT7AO00755 349 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 SMAD7O15105 426 aaKnown RBP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 ZNF862O60290 1169 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 DKC1O60832 514 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 NBNO60934 754 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 CXCL10P02778 98 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 PDCP20941 246 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 TXKP42681 527 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 QARSP47897 775 aaKnown RBP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 SMTNP53814 917 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 PSMC5P62195 406 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 SMAD3P84022 425 aaKnown RBP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 SKOR1P84550 965 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 PRKCEQ02156 737 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 ORC2Q13416 577 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 SQSTM1Q13501 440 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 DHX8Q14562 1220 aaKnown RBP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 MBTPS1Q14703 1052 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 GPNMBQ14956 572 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 EPHA7Q15375 998 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 ZNF174Q15697 407 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 UGCGQ16739 394 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 MTERF2Q49AM1 385 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 XKR3Q5GH77 459 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 CT47A1Q5JQC4 288 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 FAM26DQ5JW98 314 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 RASIP1Q5U651 963 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 IER5Q5VY09 327 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 CNKSR3Q6P9H4 555 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 MTHFD1LQ6UB35 978 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 RPAINQ86UA6 219 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 EHBP1Q8NDI1 1231 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 GPR152Q8TDT2 470 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 DNAJB3Q8WWF6 145 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms