RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ACO2Q99798 780 aaKnown RBP24.46■■□□□ 1.51
LRRK1-208ENST00000532029 TARS2Q9BW92 718 aaKnown RBP24.46■■□□□ 1.51
LRRK1-208ENST00000532029 PDZD7Q9H5P4 517 aa24.46■■□□□ 1.51
LRRK1-208ENST00000532029 ELAC1Q9H777 363 aaKnown RBP24.46■■□□□ 1.51
LRRK1-208ENST00000532029 TMEM161AQ9NX61 479 aa24.46■■□□□ 1.51
LRRK1-208ENST00000532029 GRXCR1A8MXD5 290 aa24.45■■□□□ 1.5
LRRK1-208ENST00000532029 SMC2O95347 1197 aa24.45■■□□□ 1.5
LRRK1-208ENST00000532029 MYBP10242 640 aa24.45■■□□□ 1.5
LRRK1-208ENST00000532029 KMT5BQ4FZB7 885 aa24.45■■□□□ 1.5
LRRK1-208ENST00000532029 UBXN11Q5T124 520 aa24.45■■□□□ 1.5
LRRK1-208ENST00000532029 ZPBP2Q6X784 338 aa24.45■■□□□ 1.5
LRRK1-208ENST00000532029 MAP4K3Q8IVH8 894 aa24.45■■□□□ 1.5
LRRK1-208ENST00000532029 ELOA2Q8IYF1 753 aaPredicted RBP24.45■■□□□ 1.5
LRRK1-208ENST00000532029 HPS3Q969F9 1004 aa24.45■■□□□ 1.5
LRRK1-208ENST00000532029 ACCSQ96QU6 501 aa24.45■■□□□ 1.5
LRRK1-208ENST00000532029 EIF2AQ9BY44 585 aaKnown RBP24.45■■□□□ 1.5
LRRK1-208ENST00000532029 EXOC7Q9UPT5 735 aa24.45■■□□□ 1.5
LRRK1-208ENST00000532029 TNFSF13BQ9Y275 285 aa24.45■■□□□ 1.5
LRRK1-208ENST00000532029 PCDHB2Q9Y5E7 798 aa24.45■■□□□ 1.5
LRRK1-208ENST00000532029 GJB5O95377 273 aa24.44■■□□□ 1.5
LRRK1-208ENST00000532029 NPTXRO95502 500 aa24.44■■□□□ 1.5
LRRK1-208ENST00000532029 EOMESO95936 686 aa24.44■■□□□ 1.5
LRRK1-208ENST00000532029 LIG4P49917 911 aa24.44■■□□□ 1.5
LRRK1-208ENST00000532029 EHHADHQ08426 723 aa24.44■■□□□ 1.5
LRRK1-208ENST00000532029 PSMD2Q13200 908 aa24.44■■□□□ 1.5
LRRK1-208ENST00000532029 LRIT3Q3SXY7 679 aa24.44■■□□□ 1.5
LRRK1-208ENST00000532029 L1TD1Q5T7N2 865 aaKnown RBP24.44■■□□□ 1.5
LRRK1-208ENST00000532029 FAM109BQ6ICB4 259 aaPredicted RBP24.44■■□□□ 1.5
LRRK1-208ENST00000532029 HACE1Q8IYU2 909 aa24.44■■□□□ 1.5
LRRK1-208ENST00000532029 PGBD4Q96DM1 585 aa24.44■■□□□ 1.5
LRRK1-208ENST00000532029 TCHPQ9BT92 498 aa24.44■■□□□ 1.5
LRRK1-208ENST00000532029 HNRNPDLO14979 420 aaKnown RBP24.43■■□□□ 1.5
LRRK1-208ENST00000532029 TLL1O43897 1013 aa24.43■■□□□ 1.5
LRRK1-208ENST00000532029 ZNF623O75123 536 aa24.43■■□□□ 1.5
LRRK1-208ENST00000532029 PPP1R37O75864 691 aa24.43■■□□□ 1.5
LRRK1-208ENST00000532029 CASP5P51878 434 aa24.43■■□□□ 1.5
LRRK1-208ENST00000532029 DCAF4L1Q3SXM0 396 aa24.43■■□□□ 1.5
LRRK1-208ENST00000532029 EEF1DP3Q658K8 133 aa24.43■■□□□ 1.5
LRRK1-208ENST00000532029 YME1L1Q96TA2 773 aa24.43■■□□□ 1.5
LRRK1-208ENST00000532029 STRA6Q9BX79 667 aa24.43■■□□□ 1.5
LRRK1-208ENST00000532029 FGFBP2Q9BYJ0 223 aa24.43■■□□□ 1.5
LRRK1-208ENST00000532029 SLC39A2Q9NP94 309 aa24.43■■□□□ 1.5
LRRK1-208ENST00000532029 RMND1Q9NWS8 449 aa24.43■■□□□ 1.5
LRRK1-208ENST00000532029 EIF3DO15371 548 aaKnown RBP eCLIP24.42■■□□□ 1.5
LRRK1-208ENST00000532029 HOXA2O43364 376 aa24.42■■□□□ 1.5
LRRK1-208ENST00000532029 TOM1L1O75674 476 aa24.42■■□□□ 1.5
LRRK1-208ENST00000532029 PRPF6O94906 941 aaKnown RBP24.42■■□□□ 1.5
LRRK1-208ENST00000532029 MATR3P43243 847 aaKnown RBP eCLIP24.42■■□□□ 1.5
LRRK1-208ENST00000532029 FXR1P51114 621 aaKnown RBP eCLIP24.42■■□□□ 1.5
LRRK1-208ENST00000532029 RABGGTBP53611 331 aa24.42■■□□□ 1.5
LRRK1-208ENST00000532029 SMAD3P84022 425 aaKnown RBP24.42■■□□□ 1.5
LRRK1-208ENST00000532029 KCNB1Q14721 858 aa24.42■■□□□ 1.5
LRRK1-208ENST00000532029 RAB30Q15771 203 aa24.42■■□□□ 1.5
LRRK1-208ENST00000532029 ZNF568Q3ZCX4 644 aa24.42■■□□□ 1.5
LRRK1-208ENST00000532029 MPZL3Q6UWV2 235 aa24.42■■□□□ 1.5
LRRK1-208ENST00000532029 SYCP3Q8IZU3 236 aa24.42■■□□□ 1.5
LRRK1-208ENST00000532029 SMARCE1Q969G3 411 aa24.42■■□□□ 1.5
LRRK1-208ENST00000532029 TMEM206Q9H813 350 aa24.42■■□□□ 1.5
LRRK1-208ENST00000532029 MSRAQ9UJ68 235 aa24.42■■□□□ 1.5
LRRK1-208ENST00000532029 IPPQ9Y573 584 aa24.42■■□□□ 1.5
LRRK1-208ENST00000532029 RHOBTB3O94955 611 aa24.41■■□□□ 1.5
LRRK1-208ENST00000532029 PIGRP01833 764 aa24.41■■□□□ 1.5
LRRK1-208ENST00000532029 ITGA4P13612 1032 aa24.41■■□□□ 1.5
LRRK1-208ENST00000532029 MRPL10Q7Z7H8 261 aaKnown RBP24.41■■□□□ 1.5
LRRK1-208ENST00000532029 ZBTB33Q86T24 672 aa24.41■■□□□ 1.5
LRRK1-208ENST00000532029 ZNF598Q86UK7 904 aaKnown RBP24.41■■□□□ 1.5
LRRK1-208ENST00000532029 CRIPAKQ8N1N5 446 aa24.41■■□□□ 1.5
LRRK1-208ENST00000532029 RAD9AQ99638 391 aa24.41■■□□□ 1.5
LRRK1-208ENST00000532029 ANKFY1Q9P2R3 1169 aa24.41■■□□□ 1.5
LRRK1-208ENST00000532029 INSL6Q9Y581 213 aa24.41■■□□□ 1.5
LRRK1-208ENST00000532029 PCDHA11Q9Y5I1 949 aa24.41■■□□□ 1.5
LRRK1-208ENST00000532029 UBE4BO95155 1302 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 PTPRSQ13332 1948 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 CLDN3O15551 220 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 DGKIO75912 1065 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 MCF2P10911 925 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 HARSP12081 509 aaKnown RBP24.4■■□□□ 1.5
LRRK1-208ENST00000532029 ATF7P17544 494 aaPredicted RBP24.4■■□□□ 1.5
LRRK1-208ENST00000532029 MCM4P33991 863 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 ABI1Q8IZP0 508 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 SMG8Q8ND04 991 aaKnown RBP24.4■■□□□ 1.5
LRRK1-208ENST00000532029 GLIS3Q8NEA6 775 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 LPPQ93052 612 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 GSDMAQ96QA5 445 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 APOL6Q9BWW8 343 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 CDT1Q9H211 546 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 PTPRHQ9HD43 1115 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 PCDHA5Q9Y5H7 936 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 TTC3P53804 2025 aa24.4■■□□□ 1.5
LRRK1-208ENST00000532029 FGFR1P11362 822 aa24.39■■□□□ 1.49
LRRK1-208ENST00000532029 PROZP22891 400 aa24.39■■□□□ 1.49
LRRK1-208ENST00000532029 HTRA4P83105 476 aaPredicted RBP24.39■■□□□ 1.49
LRRK1-208ENST00000532029 KCNA1Q09470 495 aa24.39■■□□□ 1.49
LRRK1-208ENST00000532029 STK4Q13043 487 aa24.39■■□□□ 1.49
LRRK1-208ENST00000532029 NOLC1Q14978 699 aaKnown RBP eCLIP24.39■■□□□ 1.49
LRRK1-208ENST00000532029 EPM2AIP1Q7L775 607 aaPredicted RBP24.39■■□□□ 1.49
LRRK1-208ENST00000532029 ZNF507Q8TCN5 953 aa24.39■■□□□ 1.49
LRRK1-208ENST00000532029 ERCC4Q92889 916 aaPredicted RBP24.39■■□□□ 1.49
LRRK1-208ENST00000532029 ZBTB45Q96K62 511 aaPredicted RBP24.39■■□□□ 1.49
LRRK1-208ENST00000532029 PBX4Q9BYU1 374 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms