RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 XRCC6P12956 609 aaKnown RBP eCLIP16.57■□□□□ 0.247e-30■□□□□ 11.2
SNHG9-201ENST00000531523 ATP2B1P20020 1258 aa16.57■□□□□ 0.24
SNHG9-201ENST00000531523 MLH1P40692 756 aa16.57■□□□□ 0.24
SNHG9-201ENST00000531523 CDCA2Q69YH5 1023 aaPredicted RBP16.57■□□□□ 0.24
SNHG9-201ENST00000531523 POTEGQ6S5H5 508 aa16.57■□□□□ 0.24
SNHG9-201ENST00000531523 TRIM67Q6ZTA4 783 aa16.57■□□□□ 0.24
SNHG9-201ENST00000531523 BMP8AQ7Z5Y6 402 aa16.57■□□□□ 0.24
SNHG9-201ENST00000531523 C4orf32Q8N8J7 132 aa16.57■□□□□ 0.24
SNHG9-201ENST00000531523 FBXO18Q8NFZ0 1043 aa16.57■□□□□ 0.24
SNHG9-201ENST00000531523 GAD1Q99259 594 aa16.57■□□□□ 0.24
SNHG9-201ENST00000531523 POLR3CQ9BUI4 534 aaPredicted RBP16.57■□□□□ 0.24
SNHG9-201ENST00000531523 FOXP1Q9H334 677 aaPredicted RBP16.57■□□□□ 0.24
SNHG9-201ENST00000531523 TUFT1Q9NNX1 390 aa16.57■□□□□ 0.24
SNHG9-201ENST00000531523 ARL5CA6NH57 179 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 TTLL13PA6NNM8 815 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 EDN1P05305 212 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 WEE2P0C1S8 567 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 OR52Z1P0C646 297 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 ITGA4P13612 1032 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 SP100P23497 879 aaPredicted RBP16.56■□□□□ 0.24
SNHG9-201ENST00000531523 ITIH3Q06033 890 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 ORC2Q13416 577 aaPredicted RBP16.56■□□□□ 0.24
SNHG9-201ENST00000531523 GIT2Q14161 759 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 TFDP1Q14186 410 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 NBR1Q14596 966 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 ECM1Q16610 540 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 TPRNQ4KMQ1 711 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 PPP4R3CPQ6ZMV5 832 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 CDR2LQ86X02 465 aaPredicted RBP16.56■□□□□ 0.24
SNHG9-201ENST00000531523 C12orf76Q8N812 135 aaPredicted RBP16.56■□□□□ 0.24
SNHG9-201ENST00000531523 CNNM3Q8NE01 707 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 BSNDQ8WZ55 320 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 ASIC4Q96FT7 647 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 ZFP42Q96MM3 310 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 KANSL3Q9P2N6 904 aa16.56■□□□□ 0.24
SNHG9-201ENST00000531523 DBR1Q9UK59 544 aaKnown RBP16.56■□□□□ 0.24
SNHG9-201ENST00000531523 MTCL1Q9Y4B5 1905 aaKnown RBP16.56■□□□□ 0.24
SNHG9-201ENST00000531523 ZMYM2Q9UBW7 1377 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 TMEM221A6NGB7 291 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 C2CD4DB7Z1M9 353 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 M0R296 226 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 RPA1P27694 616 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 CA8P35219 290 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 SCNN1GP51170 649 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 CLCN4P51793 760 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 ZNF174Q15697 407 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 PTPN21Q16825 1174 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 RARS2Q5T160 578 aaKnown RBP16.55■□□□□ 0.24
SNHG9-201ENST00000531523 KIAA1841Q6NSI8 718 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 TAS1R1Q7RTX1 841 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 KLHL5Q96PQ7 755 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 HERC2P3Q9BVR0 1158 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 UBN1Q9NPG3 1134 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 DZANK1Q9NVP4 752 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 VWA8A3KMH1 1905 aa16.55■□□□□ 0.24
SNHG9-201ENST00000531523 MYO10Q9HD67 2058 aa16.54■□□□□ 0.24
SNHG9-201ENST00000531523 A0A1B0GUA9 196 aa16.54■□□□□ 0.24
SNHG9-201ENST00000531523 SOD2P04179 222 aa16.54■□□□□ 0.24
SNHG9-201ENST00000531523 CNPP09543 421 aaKnown RBP16.54■□□□□ 0.24
SNHG9-201ENST00000531523 HMGN5P82970 282 aaKnown RBP16.54■□□□□ 0.24
SNHG9-201ENST00000531523 SAFBQ15424 915 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNHG9-201ENST00000531523 FAM187BQ17R55 369 aa16.54■□□□□ 0.24
SNHG9-201ENST00000531523 TTC38Q5R3I4 469 aa16.54■□□□□ 0.24
SNHG9-201ENST00000531523 MAEAQ7L5Y9 396 aa16.54■□□□□ 0.24
SNHG9-201ENST00000531523 NOSTRINQ8IVI9 506 aa16.54■□□□□ 0.24
SNHG9-201ENST00000531523 FBXL18Q96ME1 805 aa16.54■□□□□ 0.24
SNHG9-201ENST00000531523 CCDC113Q9H0I3 377 aa16.54■□□□□ 0.24
SNHG9-201ENST00000531523 FZD8Q9H461 694 aa16.54■□□□□ 0.24
SNHG9-201ENST00000531523 FAN1Q9Y2M0 1017 aa16.54■□□□□ 0.24
SNHG9-201ENST00000531523 GIT1Q9Y2X7 761 aa16.54■□□□□ 0.24
SNHG9-201ENST00000531523 PRG3Q9Y2Y8 225 aaPredicted RBP16.54■□□□□ 0.24
SNHG9-201ENST00000531523 TRIP11Q15643 1979 aa16.53■□□□□ 0.24
SNHG9-201ENST00000531523 NPTXRO95502 500 aa16.53■□□□□ 0.24
SNHG9-201ENST00000531523 ALDH2P05091 517 aa16.53■□□□□ 0.24
SNHG9-201ENST00000531523 SSBP05455 408 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNHG9-201ENST00000531523 AKAP5P24588 427 aa16.53■□□□□ 0.24
SNHG9-201ENST00000531523 TOB1P50616 345 aaPredicted RBP16.53■□□□□ 0.24
SNHG9-201ENST00000531523 SIGLEC14Q08ET2 396 aa16.53■□□□□ 0.24
SNHG9-201ENST00000531523 BMS1Q14692 1282 aaKnown RBP16.53■□□□□ 0.24
SNHG9-201ENST00000531523 SLC27A1Q6PCB7 646 aa16.53■□□□□ 0.24
SNHG9-201ENST00000531523 MCPH1Q8NEM0 835 aa16.53■□□□□ 0.24
SNHG9-201ENST00000531523 ZSCAN31Q96LW9 406 aaPredicted RBP16.53■□□□□ 0.24
SNHG9-201ENST00000531523 CCDC43Q96MW1 224 aaKnown RBP16.53■□□□□ 0.24
SNHG9-201ENST00000531523 NECTIN4Q96NY8 510 aa16.53■□□□□ 0.24
SNHG9-201ENST00000531523 APOL6Q9BWW8 343 aa16.53■□□□□ 0.24
SNHG9-201ENST00000531523 KCNH6Q9H252 994 aa16.53■□□□□ 0.24
SNHG9-201ENST00000531523 SH2B1Q9NRF2 756 aaPredicted RBP16.53■□□□□ 0.24
SNHG9-201ENST00000531523 LRRIQ4A6NIV6 560 aa16.52■□□□□ 0.24
SNHG9-201ENST00000531523 U2AF2P26368 475 aaKnown RBP eCLIP16.52■□□□□ 0.243e-8■■□□□ 13.8
SNHG9-201ENST00000531523 MTHFRP42898 656 aa16.52■□□□□ 0.24
SNHG9-201ENST00000531523 OR1G1P47890 313 aa16.52■□□□□ 0.24
SNHG9-201ENST00000531523 TRAPPC10P48553 1259 aa16.52■□□□□ 0.24
SNHG9-201ENST00000531523 RBM25P49756 843 aaKnown RBP16.52■□□□□ 0.24
SNHG9-201ENST00000531523 FXR2P51116 673 aaKnown RBP eCLIP16.52■□□□□ 0.24
SNHG9-201ENST00000531523 KIAA0319Q5VV43 1072 aa16.52■□□□□ 0.24
SNHG9-201ENST00000531523 CES5AQ6NT32 575 aa16.52■□□□□ 0.24
SNHG9-201ENST00000531523 PRIMPOLQ96LW4 560 aa16.52■□□□□ 0.24
SNHG9-201ENST00000531523 FAM193BQ96PV7 902 aaPredicted RBP16.52■□□□□ 0.24
SNHG9-201ENST00000531523 NACC1Q96RE7 527 aa16.52■□□□□ 0.24
SNHG9-201ENST00000531523 CXCL16Q9H2A7 254 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms