RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 SPATA6Q9NWH7 488 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-206ENST00000531430 MIOSQ9NXC5 875 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 NCDNQ9UBB6 729 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 HES2Q9Y543 173 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 CNTNAP2Q9UHC6 1331 aa10.33□□□□□ -0.76
NEDD8-206ENST00000531430 ZNF292O60281 2723 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 F8W810 466 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 TGM5O43548 720 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 KINO60870 393 aaKnown RBP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 FSHRP23945 695 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 MLH1P40692 756 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 QARSP47897 775 aaKnown RBP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 SCNN1GP51170 649 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 GPC5P78333 572 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 CSTF1Q05048 431 aaKnown RBP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 SSRP1Q08945 709 aaKnown RBP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 LAMTOR4Q0VGL1 99 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 UBXN2BQ14CS0 331 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 RSPO4Q2I0M5 234 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 Q4G0T1 1027 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 UBXN11Q5T124 520 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 KIAA0319Q5VV43 1072 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 GRASPQ7Z6J2 395 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 SKAP1Q86WV1 359 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 CEP57Q86XR8 500 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 COLGALT2Q8IYK4 626 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 CNNM3Q8NE01 707 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 PSPC1Q8WXF1 523 aaKnown RBP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 CEP89Q96ST8 783 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 RPP25Q9BUL9 199 aaKnown RBP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 EIF2AQ9BY44 585 aaKnown RBP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 PRKD2Q9BZL6 878 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 TRIM6Q9C030 488 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 MINDY3Q9H8M7 445 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 NCOA5Q9HCD5 579 aaKnown RBP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 MARCH5Q9NX47 278 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 KLK14Q9P0G3 267 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 EPS15L1Q9UBC2 864 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 PARP2Q9UGN5 583 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 DDX25Q9UHL0 483 aaKnown RBP10.32□□□□□ -0.76
NEDD8-206ENST00000531430 NUMBLQ9Y6R0 609 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 DMDP11532 3685 aa10.32□□□□□ -0.76
NEDD8-206ENST00000531430 ARL5CA6NH57 179 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 POTEMA6NI47 508 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 INO80B-WBP1J3KQ70 363 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 EML1O00423 815 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 LAMTOR5O43504 91 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 DKC1O60832 514 aaKnown RBP eCLIP10.31□□□□□ -0.76
NEDD8-206ENST00000531430 NCLP19338 710 aaKnown RBP10.31□□□□□ -0.76
NEDD8-206ENST00000531430 AKAP5P24588 427 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 HOXA11P31270 313 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-206ENST00000531430 NTHL1P78549 312 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 USP41Q3LFD5 358 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 XKR9Q5GH70 373 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 PHLDB3Q6NSJ2 640 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 POTEGQ6S5H5 508 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 CYP26C1Q6V0L0 522 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 OTUD6AQ7L8S5 288 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 EXOC8Q8IYI6 725 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 TRIM22Q8IYM9 498 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 BLIDQ8IZY5 108 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 SMG8Q8ND04 991 aaKnown RBP10.31□□□□□ -0.76
NEDD8-206ENST00000531430 ATRIPQ8WXE1 791 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 SHDQ96IW2 340 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 ZFP42Q96MM3 310 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 RNF26Q9BY78 433 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-206ENST00000531430 BCO2Q9BYV7 579 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 C22orf23Q9BZE7 217 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 PLEKHA4Q9H4M7 779 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 RXFP1Q9HBX9 757 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 PCDHA4Q9UN74 947 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 IPPQ9Y573 584 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 C2orf16Q68DN1 1984 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 WDR81Q562E7 1941 aa10.31□□□□□ -0.76
NEDD8-206ENST00000531430 CACNA1AO00555 2505 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 FAM170BA6NMN3 283 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 CPLX1O14810 134 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 ASAP2O43150 1006 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 GLULP15104 373 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 CD72P21854 359 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 RCAN1P53805 252 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 DSG1Q02413 1049 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 INF2Q27J81 1249 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 TSGA10IPQ3SY00 556 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 SLC44A4Q53GD3 710 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 NCAPH2Q6IBW4 605 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 PRSS55Q6UWB4 352 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-206ENST00000531430 PARM1Q6UWI2 310 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 CDR2LQ86X02 465 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-206ENST00000531430 TPH2Q8IWU9 490 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 HACE1Q8IYU2 909 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 HASPINQ8TF76 798 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 TCP11Q8WWU5 503 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 ZNF707Q96C28 371 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-206ENST00000531430 CNTNAP3BQ96NU0 1288 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 LARP6Q9BRS8 491 aaKnown RBP10.3□□□□□ -0.76
NEDD8-206ENST00000531430 CNTNAP3Q9BZ76 1288 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 GPR62Q9BZJ7 368 aa10.3□□□□□ -0.76
NEDD8-206ENST00000531430 DCHS1Q96JQ0 3298 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms