RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 TPM1P09493 284 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 ZNF286BP0CG31 522 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 HSPA8P11142 646 aaKnown RBP10.79□□□□□ -0.68
CTNND1-228ENST00000531007 GARTP22102 1010 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 MCCD1P59942 119 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-228ENST00000531007 CACNB2Q08289 660 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-228ENST00000531007 GRIK4Q16099 956 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 KIAA0753Q2KHM9 967 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 CCDC40Q4G0X9 1142 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 ZC2HC1CQ53FD0 456 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-228ENST00000531007 TMEM63BQ5T3F8 832 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 EFCAB12Q6NXP0 572 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 MTHFD1LQ6UB35 978 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 ZPBP2Q6X784 338 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 ZNF410Q86VK4 478 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 VSTM4Q8IW00 320 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 NME8Q8N427 588 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 LINC01465Q8N7H1 131 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 CCDC150Q8NCX0 1101 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 ZNF296Q8WUU4 475 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-228ENST00000531007 PRPF31Q8WWY3 499 aaKnown RBP10.79□□□□□ -0.68
CTNND1-228ENST00000531007 TMEM143Q96AN5 459 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 MAP7D2Q96T17 732 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 SH2D3AQ9BRG2 576 aa10.79□□□□□ -0.68
CTNND1-228ENST00000531007 NOC4LQ9BVI4 516 aaKnown RBP10.79□□□□□ -0.68
CTNND1-228ENST00000531007 ARMCX3Q9UH62 379 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-228ENST00000531007 SMIM35A0A1B0GVV1 85 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 MBLAC1A4D2B0 266 aaPredicted RBP10.78□□□□□ -0.68
CTNND1-228ENST00000531007 LRRIQ4A6NIV6 560 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 STX10O60499 249 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 LDHAP00338 332 aaKnown RBP10.78□□□□□ -0.68
CTNND1-228ENST00000531007 C6orf222P0C671 652 aaPredicted RBP10.78□□□□□ -0.68
CTNND1-228ENST00000531007 KLRC1P26715 233 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 CNGA1P29973 690 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 PURAQ00577 322 aaKnown RBP10.78□□□□□ -0.68
CTNND1-228ENST00000531007 LAMTOR4Q0VGL1 99 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 MAPK6Q16659 721 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 VWA3BQ502W6 1294 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 GNASQ5JWF2 1037 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 INTS8Q75QN2 995 aaKnown RBP10.78□□□□□ -0.68
CTNND1-228ENST00000531007 RNF180Q86T96 592 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 XXYLT1Q8NBI6 393 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 TRPV1Q8NER1 839 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 BSNDQ8WZ55 320 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 PRIMPOLQ96LW4 560 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 NAP1L5Q96NT1 182 aaPredicted RBP10.78□□□□□ -0.68
CTNND1-228ENST00000531007 TSEN34Q9BSV6 310 aaKnown RBP10.78□□□□□ -0.68
CTNND1-228ENST00000531007 IRX2Q9BZI1 471 aaPredicted RBP10.78□□□□□ -0.68
CTNND1-228ENST00000531007 SUGCTQ9HAC7 445 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 PRDM10Q9NQV6 1147 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 DAAM1Q9Y4D1 1078 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 STYXL1Q9Y6J8 313 aa10.78□□□□□ -0.68
CTNND1-228ENST00000531007 GTPBP10A4D1E9 387 aaKnown RBP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 MYL3P08590 195 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 SMIM10L2AP0DMW4 78 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 SMIM10L2BP0DMW5 78 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 CAPN2P17655 700 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 SFPQP23246 707 aaKnown RBP eCLIP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 HOXC8P31273 242 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 GRK4P32298 578 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 PBX1P40424 430 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 PHKA2P46019 1235 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 LIG4P49917 911 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 PTENP60484 403 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 POU5F1Q01860 360 aaKnown RBP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 UBXN1Q04323 297 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 PTPN11Q06124 597 aaPredicted RBP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 CAPSQ13938 189 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 FAM187BQ17R55 369 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 FIGNQ5HY92 759 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 COL13A1Q5TAT6 717 aaPredicted RBP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 ARMCX5Q6P1M9 558 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 TAF2Q6P1X5 1199 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 NFRKBQ6P4R8 1299 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 FAM43BQ6ZT52 329 aaPredicted RBP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 APBB1IPQ7Z5R6 666 aaPredicted RBP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 SESTD1Q86VW0 696 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 CREBRFQ8IUR6 639 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 TRIM59Q8IWR1 403 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 METTL13Q8N6R0 699 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 C7orf31Q8N865 590 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 KLHDC9Q8NEP7 349 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 ASAP3Q8TDY4 903 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 KAT2BQ92831 832 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 CCDC51Q96ER9 411 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 ERGIC2Q96RQ1 377 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 MRPL4Q9BYD3 311 aaKnown RBP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 PRKD2Q9BZL6 878 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 EDEM3Q9BZQ6 932 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 INO80BQ9C086 356 aaPredicted RBP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 NDST4Q9H3R1 872 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 POLD4Q9HCU8 107 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 HMX1Q9NP08 348 aaPredicted RBP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 XPNPEP3Q9NQH7 507 aa10.77□□□□□ -0.69
CTNND1-228ENST00000531007 PRMT7Q9NVM4 692 aaPredicted RBP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 DDX20Q9UHI6 824 aaKnown RBP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.77□□□□□ -0.69
CTNND1-228ENST00000531007 C17orf102A2RUQ5 167 aa10.76□□□□□ -0.69
CTNND1-228ENST00000531007 MOXD2PA6NHM9 499 aa10.76□□□□□ -0.69
CTNND1-228ENST00000531007 HNRNPDLO14979 420 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms