RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 CHRNA3P32297 505 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 DRAP1Q14919 205 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-221ENST00000529873 TKFCQ3LXA3 575 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 SYT2Q8N9I0 419 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-221ENST00000529873 TTC8Q8TAM2 541 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 TRIM55Q9BYV6 548 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 PARVAQ9NVD7 372 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 TMEM247A6NEH6 219 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 KIF28PB7ZC32 967 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 ADORA2BP29275 332 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 SDC4P31431 198 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 TMPRSS15P98073 1019 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 AP1B1Q10567 949 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 RBBP7Q16576 425 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 EFHC2Q5JST6 749 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 KRT80Q6KB66 452 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 TTC17Q96AE7 1141 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 ACAP3Q96P50 834 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 OSBPL9Q96SU4 736 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 SP110Q9HB58 689 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 KRT82Q9NSB4 513 aa9.03□□□□□ -0.96
CTNND1-221ENST00000529873 DLC1Q96QB1 1528 aa9.02□□□□□ -0.96
CTNND1-221ENST00000529873 H3BRJ5 948 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 ATP5HO75947 161 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 CASP1P29466 404 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 MDM2Q00987 491 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 OCRLQ01968 901 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 EPHA7Q15375 998 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 TAF11Q15544 211 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 FASTKD5Q7L8L6 764 aaKnown RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 SCN4BQ8IWT1 228 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 SLC44A5Q8NCS7 719 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 SNX19Q92543 992 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 G3BP2Q9UN86 482 aaKnown RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 FAM187AA6NFU0 413 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 APOL1O14791 398 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 KIAA0391O15091 583 aaKnown RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 BNIP3LO60238 219 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 EYA4O95677 639 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 RECQLP46063 649 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 PSMC1P62191 440 aaKnown RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 NFX1Q12986 1120 aaKnown RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 ZNF560Q96MR9 790 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 TSC22D3Q99576 134 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 C11orf70Q9BRQ4 267 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 PITPNM3Q9BZ71 974 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 CPVLQ9H3G5 476 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 ANLNQ9NQW6 1124 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 ZNF212Q9UDV6 495 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 APOBEC2Q9Y235 224 aaKnown RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 AXIN2Q9Y2T1 843 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 SNX24Q9Y343 169 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 FAM196BA6NMK8 535 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 YWHABP31946 246 aaKnown RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 SKOR1P84550 965 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 GJB4Q9NTQ9 266 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 FAM217BQ9NTX9 383 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 SUN2Q9UH99 717 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 ZFP69BQ9UJL9 534 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 PFASO15067 1338 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 MYO3AQ8NEV4 1616 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 FRMD3A2A2Y4 597 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 RASA4BC9J798 803 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 RASA4O43374 803 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 TMCC1O94876 653 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 KRT14P02533 472 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 PYGLP06737 847 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 ARHGDIAP52565 204 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 HEATR6Q6AI08 1181 aaKnown RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 C1orf228Q6PIY5 440 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 MAP3K20Q9NYL2 800 aaKnown RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 RBAKQ9NYW8 714 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 L3MBTL1Q9Y468 752 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 HEY1Q9Y5J3 304 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 USP42Q9H9J4 1324 aaKnown RBP9.02□□□□□ -0.97
CTNND1-221ENST00000529873 NEXMIFQ5QGS0 1516 aa9.02□□□□□ -0.97
CTNND1-221ENST00000529873 A0A1W2PQC6 194 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 GOLGA8MH3BSY2 632 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 DPYSL4O14531 572 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 SPAG7O75391 227 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 ESRRBO95718 433 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 HADHAP40939 763 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 MMS22LQ6ZRQ5 1243 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 SGMS1Q86VZ5 419 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 WDR75Q8IWA0 830 aaKnown RBP9.01□□□□□ -0.97
CTNND1-221ENST00000529873 GTSE1Q9NYZ3 720 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 F5H6K3 240 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 TRPA1O75762 1119 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 TDP2O95551 362 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 RPSAP08865 295 aaKnown RBP9.01□□□□□ -0.97
CTNND1-221ENST00000529873 MCF2P10911 925 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 KLRC3Q07444 240 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 NME3Q13232 169 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 KCNB1Q14721 858 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 RHOT1Q8IXI2 618 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 NCLNQ969V3 563 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 FAM84BQ96KN1 310 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-221ENST00000529873 NCK2O43639 380 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 CCDC159P0C7I6 412 aa9.01□□□□□ -0.97
CTNND1-221ENST00000529873 RALAP11233 206 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms