RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 ZSCAN16Q9H4T2 348 aaPredicted RBP17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 NRDE2Q9H7Z3 1164 aa17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 MTMR6Q9Y217 621 aa17.08■□□□□ 0.32
CCDC90B-215ENST00000529745 PHLPP2Q6ZVD8 1323 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 PRR33A8MZF0 331 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 ACKR2O00590 384 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 B4GALT5O43286 388 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 ITGA4P13612 1032 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 BCAR1P56945 870 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 NHLH1Q02575 133 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 PTPAQ15257 358 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 MAPK6Q16659 721 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 PUS10Q3MIT2 529 aaKnown RBP17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 CABP7Q86V35 215 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 URGCPQ8TCY9 931 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 KCNN1Q92952 543 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 DRC1Q96MC2 740 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 TMEM175Q9BSA9 504 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 PUF60Q9UHX1 559 aaKnown RBP17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 GIT1Q9Y2X7 761 aa17.07■□□□□ 0.32
CCDC90B-215ENST00000529745 N4BP3O15049 544 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 STX6O43752 255 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 PRKCBP05771 671 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 GALTP07902 379 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 LTBRP36941 435 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 ALDH7A1P49419 539 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 SLC12A3P55017 1021 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 ERVFC1P60507 584 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 KRT17Q04695 432 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 ADAM15Q13444 863 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 ADGRD2Q7Z7M1 963 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 HACE1Q8IYU2 909 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 EFHBQ8N7U6 833 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 DEPTORQ8TB45 409 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 CDCA3Q99618 268 aaPredicted RBP17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 NTPCRQ9BSD7 190 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 RUSC1Q9BVN2 902 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 TMEM134Q9H6X4 195 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 NGRNQ9NPE2 291 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 STK39Q9UEW8 545 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 KCNG1Q9UIX4 513 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 TRIP11Q15643 1979 aa17.06■□□□□ 0.32
CCDC90B-215ENST00000529745 HIP1RO75146 1068 aa17.05■□□□□ 0.32
CCDC90B-215ENST00000529745 CALML4Q96GE6 196 aa17.05■□□□□ 0.32
CCDC90B-215ENST00000529745 CDK5RAP3Q96JB5 506 aa17.05■□□□□ 0.32
CCDC90B-215ENST00000529745 CCSER1Q9C0I3 900 aa17.05■□□□□ 0.32
CCDC90B-215ENST00000529745 PDZD7Q9H5P4 517 aa17.05■□□□□ 0.32
CCDC90B-215ENST00000529745 ARHGAP28Q9P2N2 729 aa17.05■□□□□ 0.32
CCDC90B-215ENST00000529745 RBM19Q9Y4C8 960 aaKnown RBP17.05■□□□□ 0.32
CCDC90B-215ENST00000529745 CFAP54Q96N23 3096 aa17.05■□□□□ 0.32
CCDC90B-215ENST00000529745 USP34Q70CQ2 3546 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 PDCD11Q14690 1871 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 ARL5CA6NH57 179 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 B4GALT3O60512 393 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 ZC3H11AO75152 810 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 DDHD2O94830 711 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 EDN1P05305 212 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 KCNA5P22460 613 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 PBX3P40426 434 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 UBA7P41226 1012 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 NPTX2P47972 431 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 AFF1P51825 1210 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 GRIN1Q05586 938 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 RNASELQ05823 741 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 DSC1Q08554 894 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 PRPF4BQ13523 1007 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 KCNC3Q14003 757 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 LONRF3Q496Y0 759 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 ZNF280BQ86YH2 543 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 HSCBQ8IWL3 235 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 SPIRE2Q8WWL2 714 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 TMEM169Q96HH4 297 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 IGSF21Q96ID5 467 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 TRIM6Q9C030 488 aaPredicted RBP17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 NXF3Q9H4D5 531 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 CLDND1Q9NY35 253 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 DNAJB4Q9UDY4 337 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 INPP5FQ9Y2H2 1132 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 SRPRBQ9Y5M8 271 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 IRAK3Q9Y616 596 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 CLIC4Q9Y696 253 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 CITO14578 2027 aa17.04■□□□□ 0.32
CCDC90B-215ENST00000529745 GRXCR2A6NFK2 248 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 TTLL13PA6NNM8 815 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 TBX10O75333 385 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 NPTXRO95502 500 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 PLA2G4BP0C869 781 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 GTF2F1P35269 517 aaKnown RBP eCLIP17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 SLC11A1P49279 550 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 PEX3P56589 373 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 DUSP6Q16828 381 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 TMEM184AQ6ZMB5 413 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 DDX53Q86TM3 631 aaKnown RBP17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 GSTCDQ8NEC7 633 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 MSLNLQ96KJ4 702 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 ZBP1Q9H171 429 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 CD320Q9NPF0 282 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 BLOC1S4Q9NUP1 217 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 FBXO2Q9UK22 296 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms