RNA–Protein interactions for RNA: ENST00000529640.5

UBXN1-210, Transcript of UBX domain protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBXN1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-210ENST00000529640 COLGALT2Q8IYK4 626 aa18.9■□□□□ 0.62
UBXN1-210ENST00000529640 GPR161Q8N6U8 529 aaKnown RBP18.9■□□□□ 0.62
UBXN1-210ENST00000529640 CCDC136Q96JN2 1154 aa18.9■□□□□ 0.62
UBXN1-210ENST00000529640 SH2D3AQ9BRG2 576 aa18.9■□□□□ 0.62
UBXN1-210ENST00000529640 ESYT1Q9BSJ8 1104 aa18.9■□□□□ 0.62
UBXN1-210ENST00000529640 PIDD1Q9HB75 910 aa18.9■□□□□ 0.62
UBXN1-210ENST00000529640 NCDNQ9UBB6 729 aa18.9■□□□□ 0.62
UBXN1-210ENST00000529640 LRRN2O75325 713 aa18.89■□□□□ 0.61
UBXN1-210ENST00000529640 PSMD10O75832 226 aa18.89■□□□□ 0.61
UBXN1-210ENST00000529640 UBXN11Q5T124 520 aa18.89■□□□□ 0.61
UBXN1-210ENST00000529640 DHX32Q7L7V1 743 aaKnown RBP18.89■□□□□ 0.61
UBXN1-210ENST00000529640 MIER3Q7Z3K6 550 aa18.89■□□□□ 0.61
UBXN1-210ENST00000529640 BICD2Q8TD16 824 aa18.89■□□□□ 0.61
UBXN1-210ENST00000529640 PHKBQ93100 1093 aa18.89■□□□□ 0.61
UBXN1-210ENST00000529640 JPH2Q9BR39 696 aaPredicted RBP18.89■□□□□ 0.61
UBXN1-210ENST00000529640 PRKD2Q9BZL6 878 aa18.89■□□□□ 0.61
UBXN1-210ENST00000529640 FBXO4Q9UKT5 387 aa18.89■□□□□ 0.61
UBXN1-210ENST00000529640 ZFP37Q9Y6Q3 630 aaPredicted RBP18.89■□□□□ 0.61
UBXN1-210ENST00000529640 SPATA31D3P0C874 917 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 NCLP19338 710 aaKnown RBP18.88■□□□□ 0.61
UBXN1-210ENST00000529640 HOXA11P31270 313 aaPredicted RBP18.88■□□□□ 0.61
UBXN1-210ENST00000529640 ADD1P35611 737 aaKnown RBP18.88■□□□□ 0.61
UBXN1-210ENST00000529640 USP11P51784 963 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 DSC1Q08554 894 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 RNF20Q5VTR2 975 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 B3GNT9Q6UX72 402 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 SPATA31D4Q6ZUB0 917 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 GPR65Q8IYL9 337 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 GJA10Q969M2 543 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 DDX23Q9BUQ8 820 aaKnown RBP18.88■□□□□ 0.61
UBXN1-210ENST00000529640 UBN1Q9NPG3 1134 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 ANO2Q9NQ90 1003 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 CHST7Q9NS84 486 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 PCDHGA2Q9Y5H1 932 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 COL4A3BPQ9Y5P4 624 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 COL4A3Q01955 1670 aa18.88■□□□□ 0.61
UBXN1-210ENST00000529640 CCDC196A0A1B0GTZ2 297 aa18.87■□□□□ 0.61
UBXN1-210ENST00000529640 KANSL1LA0AUZ9 987 aa18.87■□□□□ 0.61
UBXN1-210ENST00000529640 LAMTOR5O43504 91 aa18.87■□□□□ 0.61
UBXN1-210ENST00000529640 TGM5O43548 720 aa18.87■□□□□ 0.61
UBXN1-210ENST00000529640 GAS2O43903 313 aaKnown RBP18.87■□□□□ 0.61
UBXN1-210ENST00000529640 OR1G1P47890 313 aa18.87■□□□□ 0.61
UBXN1-210ENST00000529640 ATXN1P54253 815 aaKnown RBP18.87■□□□□ 0.61
UBXN1-210ENST00000529640 SRGAP1Q7Z6B7 1085 aa18.87■□□□□ 0.61
UBXN1-210ENST00000529640 PALB2Q86YC2 1186 aa18.87■□□□□ 0.61
UBXN1-210ENST00000529640 CNNM3Q8NE01 707 aa18.87■□□□□ 0.61
UBXN1-210ENST00000529640 BCO2Q9BYV7 579 aa18.87■□□□□ 0.61
UBXN1-210ENST00000529640 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.87■□□□□ 0.614e-6■■■□□ 19
UBXN1-210ENST00000529640 SPATA6Q9NWH7 488 aaPredicted RBP18.87■□□□□ 0.61
UBXN1-210ENST00000529640 CHD8Q9HCK8 2581 aa18.86■□□□□ 0.61
UBXN1-210ENST00000529640 DDX11L8A8MPP1 907 aa18.86■□□□□ 0.61
UBXN1-210ENST00000529640 PRPF3O43395 683 aaKnown RBP18.86■□□□□ 0.61
UBXN1-210ENST00000529640 GPC5P78333 572 aa18.86■□□□□ 0.61
UBXN1-210ENST00000529640 LILRA6Q6PI73 481 aa18.86■□□□□ 0.61
UBXN1-210ENST00000529640 ANO5Q75V66 913 aa18.86■□□□□ 0.61
UBXN1-210ENST00000529640 SMG8Q8ND04 991 aaKnown RBP18.86■□□□□ 0.61
UBXN1-210ENST00000529640 FGF14Q92915 247 aa18.86■□□□□ 0.61
UBXN1-210ENST00000529640 RPP25Q9BUL9 199 aaKnown RBP18.86■□□□□ 0.61
UBXN1-210ENST00000529640 OSBPL6Q9BZF3 934 aa18.86■□□□□ 0.61
UBXN1-210ENST00000529640 MINDY3Q9H8M7 445 aa18.86■□□□□ 0.61
UBXN1-210ENST00000529640 PPP4R2Q9NY27 417 aa18.86■□□□□ 0.61
UBXN1-210ENST00000529640 FNIP2Q9P278 1114 aa18.86■□□□□ 0.61
UBXN1-210ENST00000529640 NID2Q14112 1375 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 PRR5-ARHGAP8B1AHC4 643 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 F8W810 466 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 ZMYND10O75800 440 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 ITGA4P13612 1032 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 FSHRP23945 695 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 MAGEA9P43362 315 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 ARHGAP8P85298 464 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 LMNB2Q03252 620 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 PRKCQQ04759 706 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 SNW1Q13573 536 aaKnown RBP18.85■□□□□ 0.61
UBXN1-210ENST00000529640 MLF2Q15773 248 aaPredicted RBP18.85■□□□□ 0.61
UBXN1-210ENST00000529640 Q4G0T1 1027 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 PLA2G4FQ68DD2 849 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 ZBTB44Q8NCP5 570 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 ST13P5Q8NFI4 369 aaPredicted RBP18.85■□□□□ 0.61
UBXN1-210ENST00000529640 CCDC148Q8NFR7 591 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 SECISBP2LQ93073 1101 aaKnown RBP18.85■□□□□ 0.61
UBXN1-210ENST00000529640 MBOAT7Q96N66 472 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 CDV3Q9UKY7 258 aaKnown RBP18.85■□□□□ 0.61
UBXN1-210ENST00000529640 CDH7Q9ULB5 785 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 NAP1L2Q9ULW6 460 aaPredicted RBP18.85■□□□□ 0.61
UBXN1-210ENST00000529640 GTF3C3Q9Y5Q9 886 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 ARID2Q68CP9 1835 aa18.85■□□□□ 0.61
UBXN1-210ENST00000529640 ARL5CA6NH57 179 aa18.84■□□□□ 0.61
UBXN1-210ENST00000529640 NR1I2O75469 434 aa18.84■□□□□ 0.61
UBXN1-210ENST00000529640 MLH1P40692 756 aa18.84■□□□□ 0.61
UBXN1-210ENST00000529640 PSMC5P62195 406 aa18.84■□□□□ 0.61
UBXN1-210ENST00000529640 CREMQ03060 361 aa18.84■□□□□ 0.61
UBXN1-210ENST00000529640 TSGA10IPQ3SY00 556 aa18.84■□□□□ 0.61
UBXN1-210ENST00000529640 PARM1Q6UWI2 310 aa18.84■□□□□ 0.61
UBXN1-210ENST00000529640 MTSS1LQ765P7 747 aa18.84■□□□□ 0.61
UBXN1-210ENST00000529640 ATRIPQ8WXE1 791 aa18.84■□□□□ 0.61
UBXN1-210ENST00000529640 PSPC1Q8WXF1 523 aaKnown RBP18.84■□□□□ 0.61
UBXN1-210ENST00000529640 SLC7A3Q8WY07 619 aa18.84■□□□□ 0.61
UBXN1-210ENST00000529640 B3GALT6Q96L58 329 aa18.84■□□□□ 0.61
UBXN1-210ENST00000529640 GAD1Q99259 594 aa18.84■□□□□ 0.61
UBXN1-210ENST00000529640 EPC1Q9H2F5 836 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms