RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 FSCN2O14926 492 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 DHX15O43143 795 aaKnown RBP9.58□□□□□ -0.88
SSBP3-212ENST00000528930 SIAH2O43255 324 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 DGKIO75912 1065 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 LARGE1O95461 756 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 EOMESO95936 686 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 SMIM10L2AP0DMW4 78 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 SMIM10L2BP0DMW5 78 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 JUNDP17535 347 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 TCF7P36402 384 aaPredicted RBP9.58□□□□□ -0.88
SSBP3-212ENST00000528930 NEK4P51957 841 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 ADAM17P78536 824 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 SP4Q02446 784 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 ITGB3BPQ13352 177 aaPredicted RBP9.58□□□□□ -0.88
SSBP3-212ENST00000528930 ANKRD1Q15327 319 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 UTP14CQ5TAP6 766 aaKnown RBP9.58□□□□□ -0.88
SSBP3-212ENST00000528930 CES5AQ6NT32 575 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 CPLX2Q6PUV4 134 aaKnown RBP9.58□□□□□ -0.88
SSBP3-212ENST00000528930 NIPA1Q7RTP0 329 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 TRIM50Q86XT4 487 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 CMTR2Q8IYT2 770 aaKnown RBP9.58□□□□□ -0.88
SSBP3-212ENST00000528930 BICD2Q8TD16 824 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 ATRIPQ8WXE1 791 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 SEPT1Q8WYJ6 367 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 PCYT2Q99447 389 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 KIF2CQ99661 725 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 SLKQ9H2G2 1235 aaPredicted RBP9.58□□□□□ -0.88
SSBP3-212ENST00000528930 ZSCAN32Q9NX65 697 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 SIT1Q9Y3P8 196 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 WASF2Q9Y6W5 498 aa9.58□□□□□ -0.88
SSBP3-212ENST00000528930 STK36Q9NRP7 1315 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 SPTA1P02549 2419 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 SHROOM3Q8TF72 1996 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 NARSO43776 548 aaKnown RBP9.57□□□□□ -0.88
SSBP3-212ENST00000528930 ATG7O95352 703 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 FDPSP14324 419 aaKnown RBP9.57□□□□□ -0.88
SSBP3-212ENST00000528930 CIITAP33076 1130 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 ZNF76P36508 570 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 NLRP5P59047 1200 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 CSRP2Q16527 193 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 TPRNQ4KMQ1 711 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 IL31Q6EBC2 164 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 PDE12Q6L8Q7 609 aaKnown RBP9.57□□□□□ -0.88
SSBP3-212ENST00000528930 KIAA1841Q6NSI8 718 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 SERINC5Q86VE9 423 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 PLA2G4DQ86XP0 818 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 NECAB1Q8N987 351 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 ZSCAN1Q8NBB4 408 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 DAGLBQ8NCG7 672 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 GLIS3Q8NEA6 775 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 PJA1Q8NG27 643 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 LENG9Q96B70 501 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 JPH1Q9HDC5 661 aaPredicted RBP9.57□□□□□ -0.88
SSBP3-212ENST00000528930 SEMA4GQ9NTN9 838 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 SETD4Q9NVD3 440 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 SLC9A2Q9UBY0 812 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 PCDHA4Q9UN74 947 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 SPAG17Q6Q759 2223 aa9.57□□□□□ -0.88
SSBP3-212ENST00000528930 KAT6AQ92794 2004 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 IGKV6D-21A0A0A0MT36 114 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 C17orf102A2RUQ5 167 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 TREHO43280 583 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 CDKL5O76039 1030 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 CCNE2O96020 404 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 RFX1P22670 979 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 THPOP40225 353 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 USP11P51784 963 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 ERVFC1P60507 584 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 ACTR2P61160 394 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 USP46P62068 366 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 ST3GAL1Q11201 340 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 CCDC6Q16204 474 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 LAIR1Q6GTX8 287 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 BLIDQ8IZY5 108 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 FAM177A1Q8N128 213 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-212ENST00000528930 ATP6V0A1Q93050 837 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 GTF3C6Q969F1 213 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 PHF20Q9BVI0 1012 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 KCNK12Q9HB15 430 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 GJB4Q9NTQ9 266 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 ZNF215Q9UL58 517 aaPredicted RBP9.56□□□□□ -0.88
SSBP3-212ENST00000528930 KCNJ14Q9UNX9 436 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 GPSM3Q9Y4H4 160 aa9.56□□□□□ -0.88
SSBP3-212ENST00000528930 IPO5O00410 1097 aaKnown RBP9.55□□□□□ -0.88
SSBP3-212ENST00000528930 FOXD2O60548 495 aaPredicted RBP9.55□□□□□ -0.88
SSBP3-212ENST00000528930 CAND2O75155 1236 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 KCNK5O95279 499 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 RETP07949 1114 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 LARP1BQ659C4 914 aaKnown RBP9.55□□□□□ -0.88
SSBP3-212ENST00000528930 GALNT17Q6IS24 598 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 ABHD15Q6UXT9 468 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 PLPPR4Q7Z2D5 763 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 NSUN7Q8NE18 718 aaKnown RBP9.55□□□□□ -0.88
SSBP3-212ENST00000528930 TBCKQ8TEA7 893 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 LMBR1Q8WVP7 490 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 PIK3R5Q8WYR1 880 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 CASP10Q92851 521 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 IRF7Q92985 503 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 SDF4Q9BRK5 362 aa9.55□□□□□ -0.88
SSBP3-212ENST00000528930 SMARCAD1Q9H4L7 1026 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms