RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 KIAA0319Q5VV43 1072 aa14□□□□□ -0.17
CCDC90B-205ENST00000525916 PLA2G4FQ68DD2 849 aa14□□□□□ -0.17
CCDC90B-205ENST00000525916 MIER3Q7Z3K6 550 aa14□□□□□ -0.17
CCDC90B-205ENST00000525916 MRPL10Q7Z7H8 261 aaKnown RBP14□□□□□ -0.17
CCDC90B-205ENST00000525916 PALB2Q86YC2 1186 aa14□□□□□ -0.17
CCDC90B-205ENST00000525916 COLGALT2Q8IYK4 626 aa14□□□□□ -0.17
CCDC90B-205ENST00000525916 SLC5A5Q92911 643 aa14□□□□□ -0.17
CCDC90B-205ENST00000525916 B3GALT6Q96L58 329 aa14□□□□□ -0.17
CCDC90B-205ENST00000525916 RIT2Q99578 217 aa14□□□□□ -0.17
CCDC90B-205ENST00000525916 RPP25Q9BUL9 199 aaKnown RBP14□□□□□ -0.17
CCDC90B-205ENST00000525916 NT5C3AQ9H0P0 336 aa14□□□□□ -0.17
CCDC90B-205ENST00000525916 RXFP1Q9HBX9 757 aa14□□□□□ -0.17
CCDC90B-205ENST00000525916 SPATA6Q9NWH7 488 aaPredicted RBP14□□□□□ -0.17
CCDC90B-205ENST00000525916 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14□□□□□ -0.17
CCDC90B-205ENST00000525916 NAP1L2Q9ULW6 460 aaPredicted RBP14□□□□□ -0.17
CCDC90B-205ENST00000525916 MAFO75444 373 aaPredicted RBP13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 PAPLNO95428 1278 aa13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 EFEMP2O95967 443 aa13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 ADD1P35611 737 aaKnown RBP13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 ATXN1P54253 815 aaKnown RBP13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 GPC5P78333 572 aa13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 EXOSC10Q01780 885 aaKnown RBP13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 DSG1Q02413 1049 aa13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 SNW1Q13573 536 aaKnown RBP13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 UBXN11Q5T124 520 aa13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 CCDC12Q8WUD4 166 aaPredicted RBP13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 FGF14Q92915 247 aa13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 PHKBQ93100 1093 aa13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 MINDY3Q9H8M7 445 aa13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 ANO2Q9NQ90 1003 aa13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 ZDHHC7Q9NXF8 308 aa13.99□□□□□ -0.17
CCDC90B-205ENST00000525916 TRIP11Q15643 1979 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 KANSL1LA0AUZ9 987 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 DDX11L8A8MPP1 907 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 SPTLC1O15269 473 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 LAMTOR5O43504 91 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 TGM5O43548 720 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 GAS2O43903 313 aaKnown RBP13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 PSMD10O75832 226 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 GNA11P29992 359 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 MLH1P40692 756 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 ZNF528Q3MIS6 628 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 PARM1Q6UWI2 310 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 RDM1Q8NG50 284 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 HDAC7Q8WUI4 952 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 SHDQ96IW2 340 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 BCO2Q9BYV7 579 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 PRKD2Q9BZL6 878 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 PLEKHA4Q9H4M7 779 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 MTF2Q9Y483 593 aaPredicted RBP13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 COL4A3BPQ9Y5P4 624 aa13.98□□□□□ -0.17
CCDC90B-205ENST00000525916 PDCD11Q14690 1871 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 CFAP47Q6ZTR5 3102 aa13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 REC8O95072 547 aa13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 RPL17P18621 184 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 NCLP19338 710 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 FSHRP23945 695 aa13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 HOXA11P31270 313 aaPredicted RBP13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 CSTF1Q05048 431 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 DSC1Q08554 894 aa13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 UBXN2BQ14CS0 331 aa13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 MLF2Q15773 248 aaPredicted RBP13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 ADCK5Q3MIX3 580 aa13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 ANO5Q75V66 913 aa13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 DHX32Q7L7V1 743 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 SMG8Q8ND04 991 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 GAD1Q99259 594 aa13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 DDX23Q9BUQ8 820 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 MIOSQ9NXC5 875 aa13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 FBXO4Q9UKT5 387 aa13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 CDV3Q9UKY7 258 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 SMG5Q9UPR3 1016 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 TICRRQ7Z2Z1 1910 aa13.97□□□□□ -0.17
CCDC90B-205ENST00000525916 ARL5CA6NH57 179 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 SRGAP2CP0DJJ0 459 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 ITGA4P13612 1032 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 SCNN1GP51170 649 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 RCAN1P53805 252 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 NPEPPSP55786 919 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 NTHL1P78549 312 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 C8orf34Q49A92 452 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 FUT10Q6P4F1 479 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 B3GNT9Q6UX72 402 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 SRGAP1Q7Z6B7 1085 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 GRASPQ7Z6J2 395 aaPredicted RBP13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 BICD2Q8TD16 824 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 ATRIPQ8WXE1 791 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 KCNB2Q92953 911 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 ZFP42Q96MM3 310 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 EIF2AQ9BY44 585 aaKnown RBP13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 GPR62Q9BZJ7 368 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 CHST7Q9NS84 486 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 BMP2KQ9NSY1 1161 aaPredicted RBP13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 HES2Q9Y543 173 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 IPPQ9Y573 584 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 PCDHGA2Q9Y5H1 932 aa13.96□□□□□ -0.17
CCDC90B-205ENST00000525916 ZFHX4Q86UP3 3567 aa13.96□□□□□ -0.18
CCDC90B-205ENST00000525916 DCDC2BA2VCK2 349 aa13.95□□□□□ -0.18
CCDC90B-205ENST00000525916 PRPF3O43395 683 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms