RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 MST1LQ2TV78 715 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 Q6ZVL8 140 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 ZBTB46Q86UZ6 589 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 Q8TCH9 128 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 HOXB13Q92826 284 aaPredicted RBP5.83□□□□□ -1.48
CD44-215ENST00000525241 TMEM176AQ96HP8 235 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 WWC2-AS2Q96NR7 200 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 SAMD11Q96NU1 681 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 TCF25Q9BQ70 676 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 CD248Q9HCU0 757 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 NCDNQ9UBB6 729 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 RCAN3Q9UKA8 241 aa5.83□□□□□ -1.48
CD44-215ENST00000525241 K7ESM1 405 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 PPM1GO15355 546 aaPredicted RBP5.82□□□□□ -1.48
CD44-215ENST00000525241 ZNF623O75123 536 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 PHF2O75151 1096 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 ZRANB2O95218 330 aaKnown RBP eCLIP5.82□□□□□ -1.48
CD44-215ENST00000525241 ADSLP30566 484 aaPredicted RBP5.82□□□□□ -1.48
CD44-215ENST00000525241 RECQLP46063 649 aaPredicted RBP5.82□□□□□ -1.48
CD44-215ENST00000525241 NPEPPSP55786 919 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 DUSP2Q05923 314 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 MGAT2Q10469 447 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 EFCAB2Q5VUJ9 269 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 ERICH6BQ5W0A0 696 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 FAM111BQ6SJ93 734 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 OR2I1PQ8NGU4 316 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 ZNF480Q8WV37 535 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 HOOK2Q96ED9 719 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 ADI1Q9BV57 179 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 GPRC5DQ9NZD1 345 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 TRPS1Q9UHF7 1281 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 ZBTB21Q9ULJ3 1066 aa5.82□□□□□ -1.48
CD44-215ENST00000525241 THRAP3Q9Y2W1 955 aaKnown RBP5.82□□□□□ -1.48
CD44-215ENST00000525241 BTBD11A6QL63 1104 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 ITGA10O75578 1167 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 STC2O76061 302 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 SNUPNO95149 360 aaKnown RBP5.81□□□□□ -1.48
CD44-215ENST00000525241 GASTP01350 101 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 GYPEP15421 78 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 MSX2P35548 267 aaPredicted RBP5.81□□□□□ -1.48
CD44-215ENST00000525241 WASP42768 502 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 SEPT2Q15019 361 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 TMEM240Q5SV17 173 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 Q6ZSN1 163 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 POLNQ7Z5Q5 900 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 CMTR2Q8IYT2 770 aaKnown RBP5.81□□□□□ -1.48
CD44-215ENST00000525241 CPA6Q8N4T0 437 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.81□□□□□ -1.48
CD44-215ENST00000525241 OR5M3Q8NGP4 307 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 NRG4Q8WWG1 115 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 LOXL4Q96JB6 756 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 TCF7L1Q9HCS4 588 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 AASDHPPTQ9NRN7 309 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 DNM3Q9UQ16 869 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 LUC7L2Q9Y383 392 aaKnown RBP5.81□□□□□ -1.48
CD44-215ENST00000525241 SH3BP1Q9Y3L3 701 aa5.81□□□□□ -1.48
CD44-215ENST00000525241 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 ADCY6O43306 1168 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 CRHR1P34998 444 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 NOMO1Q15155 1222 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 ODR4Q5SWX8 454 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 FAM180AQ6UWF9 173 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 RAVER1Q8IY67 606 aaKnown RBP5.8□□□□□ -1.48
CD44-215ENST00000525241 THEMISQ8N1K5 641 aaPredicted RBP5.8□□□□□ -1.48
CD44-215ENST00000525241 TTC9BQ8N6N2 239 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 OR7D4Q8NG98 312 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 DPF2Q92785 391 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 BORCS6Q96GS4 357 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 MPHOSPH9Q99550 1183 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 BCO1Q9HAY6 547 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 SERPINB13Q9UIV8 391 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 ST6GALNAC2Q9UJ37 374 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 JAG2Q9Y219 1238 aa5.8□□□□□ -1.48
CD44-215ENST00000525241 HOXA3O43365 443 aaPredicted RBP5.79□□□□□ -1.48
CD44-215ENST00000525241 AKAP10O43572 662 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 ABLIM3O94929 683 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 COMTP21964 271 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 EDNRBP24530 442 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 ECHS1P30084 290 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 SLC6A9P48067 706 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 GZMKP49863 264 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 RAB27AP51159 221 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 EPHB1P54762 984 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 ADKP55263 362 aaKnown RBP5.79□□□□□ -1.48
CD44-215ENST00000525241 KIF23Q02241 960 aaPredicted RBP5.79□□□□□ -1.48
CD44-215ENST00000525241 MRPL49Q13405 166 aaKnown RBP5.79□□□□□ -1.48
CD44-215ENST00000525241 FAM214AQ32MH5 1076 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 FKBP15Q5T1M5 1219 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 GJC2Q5T442 439 aaPredicted RBP5.79□□□□□ -1.48
CD44-215ENST00000525241 MAMDC4Q6UXC1 1216 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 D2HGDHQ8N465 521 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.79□□□□□ -1.48
CD44-215ENST00000525241 COA7Q96BR5 231 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 IL17RAQ96F46 866 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 ZNF512Q96ME7 567 aaPredicted RBP5.79□□□□□ -1.48
CD44-215ENST00000525241 C8orf49Q96NF6 230 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 PUS7Q96PZ0 661 aaKnown RBP5.79□□□□□ -1.48
CD44-215ENST00000525241 SMPD4Q9NXE4 827 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 INTUQ9ULD6 942 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 LIMCH1Q9UPQ0 1083 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms