RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 GNAI2P04899 355 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 GLI1P08151 1106 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 OAZ1P54368 228 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 HTRA4P83105 476 aaPredicted RBP7.9□□□□□ -1.14
SDCBP-210ENST00000522843 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.9□□□□□ -1.14
SDCBP-210ENST00000522843 FAM47CQ5HY64 1035 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 SLC9C2Q5TAH2 1124 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 LCE5AQ5TCM9 118 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 NFRKBQ6P4R8 1299 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 CNKSR3Q6P9H4 555 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 TMED8Q6PL24 325 aaPredicted RBP7.9□□□□□ -1.14
SDCBP-210ENST00000522843 DTHD1Q6ZMT9 781 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 ERMP1Q7Z2K6 904 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 RPAINQ86UA6 219 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 SPACA3Q8IXA5 215 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 SSH3Q8TE77 659 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 PRRX2Q99811 253 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 MTG1Q9BT17 334 aaPredicted RBP7.9□□□□□ -1.14
SDCBP-210ENST00000522843 UPF3BQ9BZI7 483 aaKnown RBP7.9□□□□□ -1.14
SDCBP-210ENST00000522843 ACAD9Q9H845 621 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 RNF146Q9NTX7 359 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 CLDND1Q9NY35 253 aa7.9□□□□□ -1.14
SDCBP-210ENST00000522843 TPRP12270 2363 aaKnown RBP7.9□□□□□ -1.15
SDCBP-210ENST00000522843 MICAL3Q7RTP6 2002 aa7.9□□□□□ -1.15
SDCBP-210ENST00000522843 DMXL1Q9Y485 3027 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 ZBED9Q6R2W3 1325 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 IGKV6D-41A0A0C4DH26 115 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 RBM47A0AV96 593 aaKnown RBP7.89□□□□□ -1.15
SDCBP-210ENST00000522843 PRR23AA6NEV1 266 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 H0Y858 1186 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 H3BNC9 293 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 TBX10O75333 385 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 BCAR3O75815 825 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 ZSCAN22P10073 491 aaPredicted RBP7.89□□□□□ -1.15
SDCBP-210ENST00000522843 GTF2F1P35269 517 aaKnown RBP eCLIP7.89□□□□□ -1.15
SDCBP-210ENST00000522843 ZXDAP98168 799 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 RBL2Q08999 1139 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 HYAL1Q12794 435 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 BFSP2Q13515 415 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 ENOX2Q16206 610 aaKnown RBP7.89□□□□□ -1.15
SDCBP-210ENST00000522843 EPC2Q52LR7 807 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 TIGD5Q53EQ6 642 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 MUM1L1Q5H9M0 696 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 NXPE4Q6UWF7 544 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 PRR23BQ6ZRT6 265 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 EP400NLQ6ZTU2 488 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 LRRC8DQ7L1W4 858 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 TRMT2AQ8IZ69 625 aaKnown RBP7.89□□□□□ -1.15
SDCBP-210ENST00000522843 AFAP1L1Q8TED9 768 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 ATOH1Q92858 354 aaPredicted RBP7.89□□□□□ -1.15
SDCBP-210ENST00000522843 COPS5Q92905 334 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 WDR11Q9BZH6 1224 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 NSUN3Q9H649 340 aaKnown RBP7.89□□□□□ -1.15
SDCBP-210ENST00000522843 VTA1Q9NP79 307 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 TLR9Q9NR96 1032 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 CYP39A1Q9NYL5 469 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 NYAP2Q9P242 653 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 NOP58Q9Y2X3 529 aaKnown RBP7.89□□□□□ -1.15
SDCBP-210ENST00000522843 WDR87Q6ZQQ6 2873 aa7.89□□□□□ -1.15
SDCBP-210ENST00000522843 ABHD14A-ACY1A0A1B0GW23 586 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 MED19A0JLT2 244 aaPredicted RBP7.88□□□□□ -1.15
SDCBP-210ENST00000522843 STXBP3O00186 592 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 LINC01565O15544 149 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 SURF6O75683 361 aaKnown RBP7.88□□□□□ -1.15
SDCBP-210ENST00000522843 MBD4O95243 580 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 LINC00271P0C7V0 271 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 AVPR2P30518 371 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 CPT1AP50416 773 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 SNAP25P60880 206 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 ATP8B2P98198 1209 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 PTPN11Q06124 597 aaPredicted RBP7.88□□□□□ -1.15
SDCBP-210ENST00000522843 GPM6BQ13491 265 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 PTGISQ16647 500 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 NKPD1Q17RQ9 610 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 TRIM71Q2Q1W2 868 aaKnown RBP7.88□□□□□ -1.15
SDCBP-210ENST00000522843 LRRFIP1Q32MZ4 808 aaKnown RBP7.88□□□□□ -1.15
SDCBP-210ENST00000522843 CTR9Q6PD62 1173 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 MPZL3Q6UWV2 235 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 FAM9BQ8IZU0 186 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 OR6J1Q8NGC5 347 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 FSD1Q9BTV5 496 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 ATP8A2Q9NTI2 1148 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 GPN3Q9UHW5 284 aaPredicted RBP7.88□□□□□ -1.15
SDCBP-210ENST00000522843 FEM1BQ9UK73 627 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 FAM50BQ9Y247 325 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 ZNF292O60281 2723 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 MYH4Q9Y623 1939 aa7.88□□□□□ -1.15
SDCBP-210ENST00000522843 NLRC5Q86WI3 1866 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 EP300Q09472 2414 aaPredicted RBP7.87□□□□□ -1.15
SDCBP-210ENST00000522843 LOC730098B7Z3J9 87 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 PRRG2O14669 202 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 PDGFBP01127 241 aaPredicted RBP7.87□□□□□ -1.15
SDCBP-210ENST00000522843 CKBP12277 381 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 MAPK8P45983 427 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 ID4P47928 161 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 OS9Q13438 667 aaPredicted RBP7.87□□□□□ -1.15
SDCBP-210ENST00000522843 SMAD4Q13485 552 aaKnown RBP7.87□□□□□ -1.15
SDCBP-210ENST00000522843 CBX2Q14781 532 aaPredicted RBP7.87□□□□□ -1.15
SDCBP-210ENST00000522843 PTPROQ16827 1216 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 CYFIP1Q7L576 1253 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms