RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 PLXNA4Q9HCM2 1894 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 EPOPA6NHQ4 379 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 K7ERI5 159 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 PPP1R37O75864 691 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 AMPD3Q01432 767 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 PKP1Q13835 747 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 ADGRE1Q14246 886 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 NOMO2Q5JPE7 1267 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 LRRC55Q6ZSA7 311 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 IQUBQ8NA54 791 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 URGCPQ8TCY9 931 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 PPP1R16BQ96T49 567 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 C7orf25Q9BPX7 421 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 RSAD1Q9HA92 442 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 FAM13BQ9NYF5 915 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 PCDHA7Q9UN72 937 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 PCDHB12Q9Y5F1 795 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 UBE4BO95155 1302 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 GTPBP6O43824 516 aaPredicted RBP10.41□□□□□ -0.74
CLK4-209ENST00000521621 ITGA4P13612 1032 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 FGFR4P22455 802 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 GRM5P41594 1212 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 SNRPFP62306 86 aaKnown RBP10.41□□□□□ -0.74
CLK4-209ENST00000521621 DSC1Q08554 894 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 USP49Q70CQ1 688 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 TMCO2Q7Z6W1 182 aaPredicted RBP10.41□□□□□ -0.74
CLK4-209ENST00000521621 ELOA2Q8IYF1 753 aaPredicted RBP10.41□□□□□ -0.74
CLK4-209ENST00000521621 LEO1Q8WVC0 666 aaPredicted RBP10.41□□□□□ -0.74
CLK4-209ENST00000521621 MYLIPQ8WY64 445 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 CLIC6Q96NY7 704 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 CDCA3Q99618 268 aaPredicted RBP10.41□□□□□ -0.74
CLK4-209ENST00000521621 C17orf80Q9BSJ5 609 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 PRDM12Q9H4Q4 367 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
CLK4-209ENST00000521621 PLAGL2Q9UPG8 496 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 TBKBP1A7MCY6 615 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 UPP2O95045 317 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 PAPLNO95428 1278 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 PAX3P23760 479 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 PEX3P56589 373 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 MCL1Q07820 350 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 GPM6BQ13491 265 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 MCM6Q14566 821 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 ALKAL1Q6UXT8 129 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 MAP4K3Q8IVH8 894 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 SLC39A11Q8N1S5 342 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 ADPGKQ9BRR6 497 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 COG5Q9UP83 839 aa10.41□□□□□ -0.74
CLK4-209ENST00000521621 STAT6P42226 847 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 DNM1Q05193 864 aaKnown RBP10.4□□□□□ -0.74
CLK4-209ENST00000521621 EHHADHQ08426 723 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 GRIK3Q13003 919 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 ATF7IP2Q5U623 682 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 ABI1Q8IZP0 508 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 SPPL3Q8TCT6 385 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 ZNF558Q96NG5 402 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 PLEKHA5Q9HAU0 1116 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 IRAK3Q9Y616 596 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 TRIOBPQ9H2D6 2365 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 TDRD15B5MCY1 1934 aaKnown RBP10.4□□□□□ -0.74
CLK4-209ENST00000521621 A0A087WWV3 80 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 A0A087X0B3 334 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 PVALEFA0A1B0GWK0 134 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 TMEM189-UBE2V1I3L0A0 370 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 TRAK2O60296 914 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 TOM1L1O75674 476 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 CTNNB1P35222 781 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 MPZL3Q6UWV2 235 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 RNF168Q8IYW5 571 aaPredicted RBP10.4□□□□□ -0.74
CLK4-209ENST00000521621 MAFAQ8NHW3 353 aaPredicted RBP10.4□□□□□ -0.74
CLK4-209ENST00000521621 ARNTL2Q8WYA1 636 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 MRPS27Q92552 414 aaKnown RBP10.4□□□□□ -0.74
CLK4-209ENST00000521621 UROC1Q96N76 676 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 TYW1Q9NV66 732 aaKnown RBP10.4□□□□□ -0.74
CLK4-209ENST00000521621 TBC1D13Q9NVG8 400 aa10.4□□□□□ -0.74
CLK4-209ENST00000521621 KIAA0391O15091 583 aaKnown RBP10.39□□□□□ -0.75
CLK4-209ENST00000521621 B4GALT5O43286 388 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 TBCAO75347 108 aaKnown RBP10.39□□□□□ -0.75
CLK4-209ENST00000521621 FAM13AO94988 1023 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 FGFR1P11362 822 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 STRN3Q13033 797 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 HSP90AA2PQ14568 343 aaPredicted RBP10.39□□□□□ -0.75
CLK4-209ENST00000521621 TMEM184AQ6ZMB5 413 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 ZNF720Q7Z2F6 126 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 HAUS6Q7Z4H7 955 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 DDX53Q86TM3 631 aaKnown RBP10.39□□□□□ -0.75
CLK4-209ENST00000521621 EIF2AQ9BY44 585 aaKnown RBP10.39□□□□□ -0.75
CLK4-209ENST00000521621 SPG21Q9NZD8 308 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 TFIP11Q9UBB9 837 aaKnown RBP10.39□□□□□ -0.75
CLK4-209ENST00000521621 TBX20Q9UMR3 447 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.39□□□□□ -0.75
CLK4-209ENST00000521621 MYMKA6NI61 221 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 EIF3DO15371 548 aaKnown RBP eCLIP10.39□□□□□ -0.75
CLK4-209ENST00000521621 CSDE1O75534 798 aaKnown RBP10.39□□□□□ -0.75
CLK4-209ENST00000521621 EDN1P05305 212 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 KCNE1P15382 129 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 KCNT2Q6UVM3 1135 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 CD302Q8IX05 232 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 COLGALT2Q8IYK4 626 aa10.39□□□□□ -0.75
CLK4-209ENST00000521621 HELQQ8TDG4 1101 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms