RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 ACKR2O00590 384 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CLDN3O15551 220 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZEB2O60315 1214 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FKTNO75072 461 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TOM1L1O75674 476 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 LDHAP00338 332 aaKnown RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 VTNP04004 478 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 HMGCRP04035 888 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 EDN1P05305 212 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PRKAR2AP13861 404 aaKnown RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ELNP15502 786 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PON1P27169 355 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 POLR2FP61218 127 aaKnown RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 IRX5P78411 483 aaPredicted RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 HTRA3P83110 453 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PURAQ00577 322 aaKnown RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CDC42EP1Q00587 391 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MYL7Q01449 175 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CAP1Q01518 475 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MBTD1Q05BQ5 628 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ENPEPQ07075 957 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CYP24A1Q07973 514 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CETN1Q12798 172 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TRIM32Q13049 653 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PRPF4BQ13523 1007 aaKnown RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TMEM132AQ24JP5 1023 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GNASQ5JWF2 1037 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MARCH8Q5T0T0 291 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NFRKBQ6P4R8 1299 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CYP26C1Q6V0L0 522 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 IFNLR1Q8IU57 520 aaPredicted RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZSWIM2Q8NEG5 633 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 RAET1EQ8TD07 263 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TMC2Q8TDI7 906 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CCDC127Q96BQ5 260 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZNF668Q96K58 619 aaPredicted RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZBTB45Q96K62 511 aaPredicted RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MFSD14AQ96MC6 490 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SCLT1Q96NL6 688 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ACO2Q99798 780 aaKnown RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FAM213AQ9BRX8 229 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MTG1Q9BT17 334 aaPredicted RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TCHPQ9BT92 498 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 INO80BQ9C086 356 aaPredicted RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NUCKS1Q9H1E3 243 aaKnown RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 UPF3AQ9H1J1 476 aaKnown RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FZD8Q9H461 694 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PLCB1Q9NQ66 1216 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 AGPAT5Q9NUQ2 364 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SPTLC3Q9NUV7 552 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PRMT7Q9NVM4 692 aaPredicted RBP8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SAGE1Q9NXZ1 904 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GCNT4Q9P109 453 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ANKFY1Q9P2R3 1169 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 USP20Q9Y2K6 914 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ANK1P16157 1881 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FRMPD3Q5JV73 1810 aa8.31□□□□□ -1.08
SCARNA20.1-201ENST00000516009 A0A087WZ62 844 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 A0A0B4J269 797 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SMIM35A0A1B0GVV1 85 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MYADML2A6NDP7 307 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SOWAHDA6NJG2 315 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TULP1O00294 542 aaPredicted RBP8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 EPHB6O15197 1021 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 P4HA2O15460 535 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NOL4O94818 638 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PGK1P00558 417 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GNAT1P11488 350 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CYP2C9P11712 490 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 HARSP12081 509 aaKnown RBP8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SLC9A1P19634 815 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CCND3P30281 292 aaPredicted RBP8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CLCN1P35523 988 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ACOT2P49753 483 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MXI1P50539 228 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GPC3P51654 580 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PRMT2P55345 433 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NLRP11P59045 1033 aaKnown RBP8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MCCD1P59942 119 aaPredicted RBP8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 DLG4P78352 724 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NKX3-2P78367 333 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CBWD6Q4V339 395 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CBWD3Q5JTY5 395 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CBWD5Q5RIA9 395 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ATF7IP2Q5U623 682 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 E4F1Q66K89 784 aaPredicted RBP8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PDXDC1Q6P996 788 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TSHZ1Q6ZSZ6 1077 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 RRAGAQ7L523 313 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZNF410Q86VK4 478 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KIAA0319LQ8IZA0 1049 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CCAR2Q8N163 923 aaKnown RBP8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 C7orf31Q8N865 590 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PARD3BQ8TEW8 1205 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NLRP7Q8WX94 980 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 BAP1Q92560 729 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FDXACB1Q9BRP7 624 aaPredicted RBP8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 INTS2Q9H0H0 1204 aaKnown RBP8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FAM49AQ9H0Q0 323 aaPredicted RBP8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GANQ9H2C0 597 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms