RNA–Protein interactions for RNA: ENST00000515802.5

SH3BP2-229, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,247 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-229ENST00000515802 GRID2IPA4D2P6 1211 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 LRRIQ3A6PVS8 624 aaPredicted RBP16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 FOXN3O00409 490 aaPredicted RBP16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 GGPS1O95749 300 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 CETN1Q12798 172 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 NEDD9Q14511 834 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 BRDTQ58F21 947 aaPredicted RBP16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 GLYCTKQ8IVS8 523 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 CCDC127Q96BQ5 260 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 RPGRIP1Q96KN7 1286 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 POP1Q99575 1024 aaKnown RBP16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 PORCNQ9H237 461 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 UBE2TQ9NPD8 197 aaPredicted RBP16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 CALCOCO1Q9P1Z2 691 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 GLTPD2A6NH11 291 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 FTCDO95954 541 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 TGFB3P10600 412 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 TCP1P17987 556 aaKnown RBP16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 GLRA2P23416 452 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 MAP2K1Q02750 393 aaPredicted RBP16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 BRD3Q15059 726 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 LDLRAD1Q5T700 205 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 METTL7BQ6UX53 244 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 FASTKD5Q7L8L6 764 aaKnown RBP16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 ARMC9Q7Z3E5 817 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 ZNF572Q7Z3I7 529 aaPredicted RBP16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 U2AF1L4Q8WU68 220 aaKnown RBP16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 MFSD14AQ96MC6 490 aa16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 TOPORSQ9NS56 1045 aaPredicted RBP16.33■□□□□ 0.2
SH3BP2-229ENST00000515802 TBC1D8O95759 1140 aa16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 TCF7P36402 384 aaPredicted RBP16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 VSNL1P62760 191 aa16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 CYP24A1Q07973 514 aa16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 KIF22Q14807 665 aa16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 TARBP2Q15633 366 aaKnown RBP16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 SEMA4DQ92854 862 aa16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 KAT5Q92993 513 aa16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 BICD1Q96G01 975 aa16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 SMARCAL1Q9NZC9 954 aa16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 EHD2Q9NZN4 543 aa16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 FEZ2Q9UHY8 353 aaPredicted RBP16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 USP20Q9Y2K6 914 aa16.32■□□□□ 0.2
SH3BP2-229ENST00000515802 OSBPP22059 807 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 GARTP22102 1010 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 ARL2P36404 184 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 C2orf54Q08AI8 447 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 AFAP1L1Q8TED9 768 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 SLC7A3Q8WY07 619 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 MYCBPQ99417 103 aaPredicted RBP16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 MMP19Q99542 508 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 ARFGAP3Q9NP61 516 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.25e-8■■■■■ 125
SH3BP2-229ENST00000515802 H0YCG3 227 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 SASH3O75995 380 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 COPB2P35606 906 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 STAT5BP51692 787 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 MEI1Q5TIA1 1274 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 PALB2Q86YC2 1186 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 FMNL3Q8IVF7 1028 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 GPD1LQ8N335 351 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 TMC2Q8TDI7 906 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 KCNN1Q92952 543 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 TSKSQ9UJT2 592 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 PACSIN2Q9UNF0 486 aaPredicted RBP16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 PLXNA1Q9UIW2 1896 aa16.31■□□□□ 0.2
SH3BP2-229ENST00000515802 H2AFZP0C0S5 128 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 KCTD2Q14681 263 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 KRT39Q6A163 491 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 H2AFVQ71UI9 128 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 LRRC57Q8N9N7 239 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 SLC20A1Q8WUM9 679 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 SEPT1Q8WYJ6 367 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 FAM213AQ9BRX8 229 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 TMEM8AQ9HCN3 771 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 INTUQ9ULD6 942 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 COQ4Q9Y3A0 265 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 CEP83Q9Y592 693 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 CCDC172P0C7W6 258 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 CYP2C8P10632 490 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 NAMPTP43490 491 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 GALCP54803 685 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 ERVK-9P63128 1117 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 SNAPC2Q13487 334 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 LONRF2Q1L5Z9 754 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 HSDL1Q3SXM5 330 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 FAM160B1Q5W0V3 765 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 FBXO16Q8IX29 292 aaPredicted RBP16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 HNRNPLLQ8WVV9 542 aaKnown RBP16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 FAM84AQ96KN4 292 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 KREMEN1Q96MU8 473 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 GOLPH3Q9H4A6 298 aa16.3■□□□□ 0.2
SH3BP2-229ENST00000515802 PLXNB2O15031 1838 aa16.29■□□□□ 0.2
SH3BP2-229ENST00000515802 LRRIQ4A6NIV6 560 aa16.29■□□□□ 0.2
SH3BP2-229ENST00000515802 EDN1P05305 212 aa16.29■□□□□ 0.2
SH3BP2-229ENST00000515802 POTEJP0CG39 1038 aa16.29■□□□□ 0.2
SH3BP2-229ENST00000515802 ABCD1P33897 745 aa16.29■□□□□ 0.2
SH3BP2-229ENST00000515802 RFC5P40937 340 aa16.29■□□□□ 0.2
SH3BP2-229ENST00000515802 LIG4P49917 911 aa16.29■□□□□ 0.2
SH3BP2-229ENST00000515802 ITIH3Q06033 890 aa16.29■□□□□ 0.2
SH3BP2-229ENST00000515802 DRP2Q13474 957 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms