RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	ADRB2	P07550	413 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	SLC18A3	Q16572	532 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	OTUD6A	Q7L8S5	288 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	SYN2	Q92777	582 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	JPH2	Q9BR39	696 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	MKNK1	Q9BUB5	465 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	TMEM206	Q9H813	350 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	CYP26B1	Q9NR63	512 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	DNAJC12	Q9UKB3	198 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	TBX20	Q9UMR3	447 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	SH3BP1	Q9Y3L3	701 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	PDE2A	O00408	941 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	ERLIN2	O94905	339 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	CNGA1	P29973	690 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	DPP9	Q86TI2	863 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	XXYLT1	Q8NBI6	393 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	INTS2	Q9H0H0	1204 aa	Known RBP	11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	DOCK3	Q8IZD9	2030 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	CTAGE15	A4D2H0	777 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	TMCO5B	A8MYB1	307 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	TACC1	O75410	805 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	SUPT20HL2	P0C7V6	817 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	CTAGE8	P0CG41	777 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	KRT13	P13646	458 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	SSR1	P43307	286 aa	Known RBP	11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	SMTN	P53814	917 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	DRAP1	Q14919	205 aa	Predicted RBP	11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	NFIL3	Q16649	462 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	PHLDB3	Q6NSJ2	640 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	NFRKB	Q6P4R8	1299 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	ZNF662	Q6ZS27	426 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	CTAGE6	Q86UF2	777 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	CTAGE4	Q8IX94	777 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	EFCAB13	Q8IY85	973 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	CEP112	Q8N8E3	955 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	EHBP1	Q8NDI1	1231 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	COG1	Q8WTW3	980 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	GLG1	Q92896	1179 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	CDHR1	Q96JP9	859 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	DNAH12	Q6ZR08	3092 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	VAMP7	P51809	220 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	NCKAP1L	P55160	1127 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	MRPS25	P82663	173 aa	Known RBP	11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	C1orf220	Q5T0J3	134 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	CCDC102A	Q96A19	550 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	PNKP	Q96T60	521 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	SENP7	Q9BQF6	1050 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	TSGA10	Q9BZW7	698 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	ZNF302	Q9NR11	478 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	WDR81	Q562E7	1941 aa		11.4	□□□□□ -0.58
CDK18-222	ENST00000515494	EVI5	O60447	810 aa		11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	FTCD	O95954	541 aa		11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	TXN	P10599	105 aa	Known RBP	11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	TCF7	P36402	384 aa	Predicted RBP	11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	PRAMEF19	Q5SWL8	479 aa		11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	PAPD7	Q5XG87	772 aa	Known RBP	11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	MIS18BP1	Q6P0N0	1132 aa		11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	SLC39A4	Q6P5W5	647 aa		11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	SLC9A9	Q8IVB4	645 aa		11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	KAT5	Q92993	513 aa		11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	MROH8	Q9H579	483 aa		11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	ANKZF1	Q9H8Y5	726 aa		11.4	□□□□□ -0.59
CDK18-222	ENST00000515494	MYH9	P35579	1960 aa	Known RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	SYNGAP1	Q96PV0	1343 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	LOC285556	D6RIA3	1793 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	GSTTP1	A0A1W2PQM5	241 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494		H3BQF6	201 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	NOP56	O00567	594 aa	Known RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	FARP2	O94887	1054 aa	Predicted RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	JAM2	P57087	298 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	TAF1C	Q15572	869 aa	Predicted RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	WHAMMP3	Q1A5X7	153 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	HSP90B2P	Q58FF3	399 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	ARMCX2	Q7L311	632 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	GPR161	Q8N6U8	529 aa	Known RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	TRIM58	Q8NG06	486 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	RDM1	Q8NG50	284 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	RABGGTA	Q92696	567 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	PDE11A	Q9HCR9	933 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	NFASC	O94856	1347 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	HNRNPDL	O14979	420 aa	Known RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	RDX	P35241	583 aa	Known RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	POLG	P54098	1239 aa	Predicted RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	CCNA1	P78396	465 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	NAIF1	Q69YI7	327 aa	Predicted RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	CAGE1	Q8TC20	777 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	TRAPPC12	Q8WVT3	735 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	BICD1	Q96G01	975 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494		F8VZ95	297 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	ATP8B1	O43520	1251 aa		11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	SNRNP35	Q16560	246 aa	Known RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	ALKBH5	Q6P6C2	394 aa	Known RBP	11.39	□□□□□ -0.59
CDK18-222	ENST00000515494	GLYCTK	Q8IVS8	523 aa		11.39	□□□□□ -0.59

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