RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CNNM3Q8NE01 707 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 APOL6Q9BWW8 343 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 LRRC27Q9C0I9 530 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 TYW1Q9NV66 732 aaKnown RBP15.35■□□□□ 0.05
USP46-209ENST00000514536 KBTBD4Q9NVX7 518 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 CHMP5Q9NZZ3 219 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 IPPQ9Y573 584 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 PHLPP2Q6ZVD8 1323 aa15.35■□□□□ 0.05
USP46-209ENST00000514536 H0YCG3 227 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 OFD1O75665 1012 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 LINC00271P0C7V0 271 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 ITGA4P13612 1032 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 PFKFB1P16118 471 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 NMT1P30419 496 aaKnown RBP15.34■□□□□ 0.05
USP46-209ENST00000514536 BMPR1AP36894 532 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 STRN3Q13033 797 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 SPOUT1Q5T280 376 aaKnown RBP15.34■□□□□ 0.05
USP46-209ENST00000514536 ATF7IP2Q5U623 682 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 LRRC55Q6ZSA7 311 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 SFR1Q86XK3 245 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 FAM178BQ8IXR5 827 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 FBXO22Q8NEZ5 403 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 CLP1Q92989 425 aaKnown RBP15.34■□□□□ 0.05
USP46-209ENST00000514536 SAMD11Q96NU1 681 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 ACO2Q99798 780 aaKnown RBP15.34■□□□□ 0.05
USP46-209ENST00000514536 TARS2Q9BW92 718 aaKnown RBP15.34■□□□□ 0.05
USP46-209ENST00000514536 TNMDQ9H2S6 317 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 HCSTQ9UBK5 93 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 SERTAD1Q9UHV2 236 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 INPP5FQ9Y2H2 1132 aa15.34■□□□□ 0.05
USP46-209ENST00000514536 UNC80Q8N2C7 3258 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.33■□□□□ 0.05
USP46-209ENST00000514536 A0A1W2PQ27 194 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 A0A1W2PQ64 194 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 A0A1W2PQD8 194 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 K7ENM7 598 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 CTNNB1P35222 781 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 AMPD3Q01432 767 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 GLB1LQ6UWU2 654 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 FSIP1Q8NA03 581 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 FIZ1Q96SL8 496 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 GAS2L1Q99501 681 aaPredicted RBP15.33■□□□□ 0.05
USP46-209ENST00000514536 PYM1Q9BRP8 204 aaKnown RBP15.33■□□□□ 0.05
USP46-209ENST00000514536 ADPGKQ9BRR6 497 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 MRPL4Q9BYD3 311 aaKnown RBP15.33■□□□□ 0.05
USP46-209ENST00000514536 NXF3Q9H4D5 531 aaKnown RBP15.33■□□□□ 0.05
USP46-209ENST00000514536 RSAD1Q9HA92 442 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 TSHZ2Q9NRE2 1034 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 TNFSF13BQ9Y275 285 aa15.33■□□□□ 0.05
USP46-209ENST00000514536 IGFBP4P22692 258 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 AKAP5P24588 427 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 AFMP43652 599 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 AFF1P51825 1210 aaKnown RBP15.32■□□□□ 0.04
USP46-209ENST00000514536 ADGRE1Q14246 886 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 HERC4Q5GLZ8 1057 aaPredicted RBP15.32■□□□□ 0.04
USP46-209ENST00000514536 NOMO2Q5JPE7 1267 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 CEP57L1Q8IYX8 460 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 GDPD5Q8WTR4 605 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 TRIM9Q9C026 710 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 CWH43Q9H720 699 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 PANK4Q9NVE7 773 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 TBC1D7Q9P0N9 293 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 PARP2Q9UGN5 583 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 HPSEQ9Y251 543 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 RWDD3Q9Y3V2 267 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 EYSQ5T1H1 3165 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 COL4A6Q14031 1691 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 CDH23Q9H251 3354 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 RB1P06400 928 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 SLFN14P0C7P3 912 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 FOSL2P15408 326 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 GAP43P17677 238 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 SYKP43405 635 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 NDUFA8P51970 172 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 GPM6BQ13491 265 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 ZC2HC1CQ53FD0 456 aaPredicted RBP15.32■□□□□ 0.04
USP46-209ENST00000514536 ZNF720Q7Z2F6 126 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 ZBTB33Q86T24 672 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 HACE1Q8IYU2 909 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 LRRC43Q8N309 656 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 MRPS27Q92552 414 aaKnown RBP15.32■□□□□ 0.04
USP46-209ENST00000514536 ZBTB45Q96K62 511 aaPredicted RBP15.32■□□□□ 0.04
USP46-209ENST00000514536 C7orf25Q9BPX7 421 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 TCHPQ9BT92 498 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 MAGEF1Q9HAY2 307 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 PTPRHQ9HD43 1115 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 UBN1Q9NPG3 1134 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 TBX20Q9UMR3 447 aa15.32■□□□□ 0.04
USP46-209ENST00000514536 FAM237AA0A1B0GTK4 181 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 GOLGA6L4A6NEF3 574 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 C5orf67F2Z3F1 127 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 H3BNC9 293 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 ACTN4O43707 911 aaKnown RBP15.31■□□□□ 0.04
USP46-209ENST00000514536 LPXNO60711 386 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 CASP1P29466 404 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 ASIC1P78348 528 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 GTF2BQ00403 316 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 CCDC65Q8IXS2 484 aa15.31■□□□□ 0.04
USP46-209ENST00000514536 GRAMD1CQ8IYS0 662 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms