RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 BAG1Q99933 345 aaPredicted RBP17.43■□□□□ 0.38
NUP54-214ENST00000514307 TARS2Q9BW92 718 aaKnown RBP17.43■□□□□ 0.38
NUP54-214ENST00000514307 GCOM2Q9BZD3 368 aaPredicted RBP17.43■□□□□ 0.38
NUP54-214ENST00000514307 CCDC113Q9H0I3 377 aa17.43■□□□□ 0.38
NUP54-214ENST00000514307 HMX1Q9NP08 348 aaPredicted RBP17.43■□□□□ 0.38
NUP54-214ENST00000514307 DDX20Q9UHI6 824 aaKnown RBP17.43■□□□□ 0.38
NUP54-214ENST00000514307 DAAM1Q9Y4D1 1078 aa17.43■□□□□ 0.38
NUP54-214ENST00000514307 A0A0B4J269 797 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 PGK1P00558 417 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 CCND3P30281 292 aaPredicted RBP17.42■□□□□ 0.38
NUP54-214ENST00000514307 GRK4P32298 578 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 TRIM32Q13049 653 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 SURF1Q15526 300 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 KYAT1Q16773 422 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 TSHZ1Q6ZSZ6 1077 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 CACNA2D4Q7Z3S7 1137 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 RSPH3Q86UC2 560 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 TMTC1Q8IUR5 882 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 TC2NQ8N9U0 490 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 LENG1Q96BZ8 264 aaPredicted RBP17.42■□□□□ 0.38
NUP54-214ENST00000514307 ACO2Q99798 780 aaKnown RBP17.42■□□□□ 0.38
NUP54-214ENST00000514307 MSTO1Q9BUK6 570 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 TMX1Q9H3N1 280 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 TSKSQ9UJT2 592 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 SIK3Q9Y2K2 1263 aa17.42■□□□□ 0.38
NUP54-214ENST00000514307 A0A087WZ62 844 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 TTC26A0AVF1 554 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 PMM2O15305 246 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 CCP110O43303 1012 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 MFAP3LO75121 409 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 GYPCP04921 128 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 CST5P28325 142 aaPredicted RBP17.41■□□□□ 0.38
NUP54-214ENST00000514307 FMO5P49326 533 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 NLRP11P59045 1033 aaKnown RBP17.41■□□□□ 0.38
NUP54-214ENST00000514307 ARID5BQ14865 1188 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 PTPN21Q16825 1174 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 TAF2Q6P1X5 1199 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 ARRDC4Q8NCT1 418 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 KLHDC9Q8NEP7 349 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 VTI1AQ96AJ9 217 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 FDXACB1Q9BRP7 624 aaPredicted RBP17.41■□□□□ 0.38
NUP54-214ENST00000514307 FAM213AQ9BRX8 229 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 TSEN34Q9BSV6 310 aaKnown RBP17.41■□□□□ 0.38
NUP54-214ENST00000514307 KCNF1Q9H3M0 494 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 PLCB1Q9NQ66 1216 aa17.41■□□□□ 0.38
NUP54-214ENST00000514307 MYH9P35579 1960 aaKnown RBP17.4■□□□□ 0.38
NUP54-214ENST00000514307 GOLGA8IPA6NC78 632 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 GOLGA8JA6NMD2 632 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 TISP43B9A030 160 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 ARHGAP6O43182 974 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 KCNJ6P48051 423 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 ADAM17P78536 824 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 POU5F1Q01860 360 aaKnown RBP17.4■□□□□ 0.38
NUP54-214ENST00000514307 KCNMA1Q12791 1236 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 LRMPQ12912 555 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 KCNA10Q16322 511 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 SLC39A4Q6P5W5 647 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 FMNL3Q8IVF7 1028 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 EHBP1Q8NDI1 1231 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 KIAA1524Q8TCG1 905 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 FNBP1Q96RU3 617 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 IFT122Q9HBG6 1241 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 FAM207AQ9NSI2 230 aaPredicted RBP17.4■□□□□ 0.38
NUP54-214ENST00000514307 HDAC6Q9UBN7 1215 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 TNFSF13BQ9Y275 285 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 TRIM17Q9Y577 477 aa17.4■□□□□ 0.38
NUP54-214ENST00000514307 OGTO15294 1046 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 ADAMTS4O75173 837 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 VTNP04004 478 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 FXR1P51114 621 aaKnown RBP eCLIP17.39■□□□□ 0.37
NUP54-214ENST00000514307 GPC3P51654 580 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 AP3M2P53677 418 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 MBTD1Q05BQ5 628 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 PTPN11Q06124 597 aaPredicted RBP17.39■□□□□ 0.37
NUP54-214ENST00000514307 MCL1Q07820 350 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 CYP24A1Q07973 514 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 NBPF20Q3BBV1 942 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 COL13A1Q5TAT6 717 aaPredicted RBP17.39■□□□□ 0.37
NUP54-214ENST00000514307 ATF7IP2Q5U623 682 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 MPZL3Q6UWV2 235 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 CXCL17Q6UXB2 119 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 CYP26C1Q6V0L0 522 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 PARD3BQ8TEW8 1205 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 SAAL1Q96ER3 474 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 LSM14BQ9BX40 385 aaKnown RBP17.39■□□□□ 0.37
NUP54-214ENST00000514307 CEP72Q9P209 647 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 DOCK5Q9H7D0 1870 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 MCM3APO60318 1980 aa17.39■□□□□ 0.37
NUP54-214ENST00000514307 TULP1O00294 542 aaPredicted RBP17.38■□□□□ 0.37
NUP54-214ENST00000514307 ERLIN2O94905 339 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 MYCNP04198 464 aaPredicted RBP17.38■□□□□ 0.37
NUP54-214ENST00000514307 INHAP05111 366 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 ASGR1P07306 291 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 GJB1P08034 283 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 PON1P27169 355 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 CCZ1BP86790 482 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 CCZ1P86791 482 aaPredicted RBP17.38■□□□□ 0.37
NUP54-214ENST00000514307 CAP1Q01518 475 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 PSMD6Q15008 389 aa17.38■□□□□ 0.37
NUP54-214ENST00000514307 SESTD1Q86VW0 696 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms