RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 DDX49Q9Y6V7 483 aaKnown RBP7.54□□□□□ -1.2
HMGN1P17-201ENST00000513734 PLIN4Q96Q06 1357 aa7.54□□□□□ -1.2
HMGN1P17-201ENST00000513734 CDH23Q9H251 3354 aa7.54□□□□□ -1.2
HMGN1P17-201ENST00000513734 DOCK5Q9H7D0 1870 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 KIAA1217Q5T5P2 1943 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 IGLV1-40P01703 118 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 ZFYP08048 801 aaPredicted RBP7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 H2AFB1P0C5Y9 115 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 H2AFB2P0C5Z0 115 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 CNGA1P29973 690 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 ZNF445P59923 1031 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 SNAP25P60880 206 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 PPARAQ07869 468 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 HDAC1Q13547 482 aaPredicted RBP7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 ZNF589Q86UQ0 364 aaPredicted RBP7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 MFSD4AQ8N468 514 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 FAM181AQ8N9Y4 354 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 SHCBP1Q8NEM2 672 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 MAML3Q96JK9 1138 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 MKNK2Q9HBH9 465 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 LRRC4CQ9HCJ2 640 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 HOXC10Q9NYD6 342 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 CLIP2Q9UDT6 1046 aa7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.53□□□□□ -1.2
HMGN1P17-201ENST00000513734 A0A0C4DFX4 3053 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 TRIP12Q14669 1992 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 A0A1W2PQU0 124 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 ESYT3A0FGR9 886 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 F5H6K3 240 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 NOP56O00567 594 aaKnown RBP7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 ERC2O15083 957 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 GSC2O15499 205 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 ITGAVP06756 1048 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 FAM153BP0C7A2 387 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 ZNF865P0CJ78 1059 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 ITIH2P19823 946 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 PTGS1P23219 599 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 MAGEA10P43363 369 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 IRX6P78412 446 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 TFAP4Q01664 338 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 KLRC3Q07444 240 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 TNK2Q07912 1038 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 NMIQ13287 307 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 PPP2R5DQ14738 602 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 C2orf27AQ580R0 203 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 GJC2Q5T442 439 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 MFSD14CQ5VZR4 134 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 OLFML2BQ68BL8 750 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 C22orf34Q6ZV56 151 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 DPP9Q86TI2 863 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 RIOX2Q8IUF8 465 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 MB21D1Q8N884 522 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 ZNF513Q8N8E2 541 aaPredicted RBP7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 BVESQ8NE79 360 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 SGSM3Q96HU1 749 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 MMP19Q99542 508 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 SPOCK3Q9BQ16 436 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 SLF1Q9BQI6 1058 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 NAPBQ9H115 298 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 NOL6Q9H6R4 1146 aaKnown RBP7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 SH2D4AQ9H788 454 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 RAVER2Q9HCJ3 691 aaKnown RBP7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 IL17RBQ9NRM6 502 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 MTMR4Q9NYA4 1195 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 NYAP2Q9P242 653 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 DDX20Q9UHI6 824 aaKnown RBP7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 AKT3Q9Y243 479 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 CAPN6Q9Y6Q1 641 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 U3KQE9 123 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 SCN5AQ14524 2016 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 UNC80Q8N2C7 3258 aa7.52□□□□□ -1.21
HMGN1P17-201ENST00000513734 REV3LO60673 3130 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 ADCY6O43306 1168 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 PROCP04070 461 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 FCER1AP12319 257 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 GNAT2P19087 354 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 STAT3P40763 770 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 OXCT1P55809 520 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 HAND2P61296 217 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 SQSTM1Q13501 440 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 ZNF792Q3KQV3 632 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 SNRNP48Q6IEG0 339 aaKnown RBP7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 ZNF227Q86WZ6 799 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 TBC1D10CQ8IV04 446 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 CPXCR1Q8N123 301 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 FIBCD1Q8N539 461 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 GDF15Q99988 308 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 DSCC1Q9BVC3 393 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 SENP6Q9GZR1 1112 aaPredicted RBP7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 IL25Q9H293 177 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 MROH8Q9H579 483 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 FANCLQ9NW38 375 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 NR2E3Q9Y5X4 410 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 FHOD1Q9Y613 1164 aa7.51□□□□□ -1.21
HMGN1P17-201ENST00000513734 MYADML2A6NDP7 307 aa7.5□□□□□ -1.21
HMGN1P17-201ENST00000513734 MEIS1O00470 390 aa7.5□□□□□ -1.21
HMGN1P17-201ENST00000513734 MSTNO14793 375 aa7.5□□□□□ -1.21
HMGN1P17-201ENST00000513734 SIGLEC6O43699 453 aa7.5□□□□□ -1.21
HMGN1P17-201ENST00000513734 STRNO43815 780 aa7.5□□□□□ -1.21
HMGN1P17-201ENST00000513734 PRAMEF1O95521 474 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms